Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1762 |
Symbol | |
ID | 5109342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1936288 |
End bp | 1936839 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640502994 |
Product | glutathione peroxidase |
Protein accession | YP_001187258 |
Protein GI | 146306793 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.533866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTC ATCGTCTTGC CTGCTCCTTG CTGCTCTCCA GCCTGGCATT GCCGGTGCTG GCCGCCGAAT GTCCGGCACT GCTGCAGGGA GAATTGCCCA AGCTGCGCGC CAAGGGTGAG AGCGTCGAAC TCTGCCAGTT CGCCGGCAAG CCGCTGGTGG TGGTCAATAC CGCCAGCTTC TGCGGCTTCA CCCCGCAATT CAAAGGGCTC GAAGCGCTGT ACCAGCGTTA CAAGGATCAG GGCCTGGAAG TGCTGGGCGT GCCGTCCGAC GATTTCCGTC AGGAGGCCGA CAGCAGCGAG GAAACCGCCA CCGTCTGCTA CGTCAACTAC GGCGTGACCT TCGCCATGAC CGAGCCGCAG CCGGTTTCCG GGGGCAATGC CATCCCCCTG TTCAAGGGCC TGGCCGAGCA GAGCAGGGCG CCGCGCTGGA ATTTCTTCAA ATATGTGGTC GACCGTCAGG GCAAGGTGGT GGCCAGTTTT TCCAGCCTGA CCAAGCCGGA TGACCCCGAG CTGGTCGCCG CGGTGGAGAA GGCAATCGCC TCGCAACCCT GA
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Protein sequence | MSLHRLACSL LLSSLALPVL AAECPALLQG ELPKLRAKGE SVELCQFAGK PLVVVNTASF CGFTPQFKGL EALYQRYKDQ GLEVLGVPSD DFRQEADSSE ETATVCYVNY GVTFAMTEPQ PVSGGNAIPL FKGLAEQSRA PRWNFFKYVV DRQGKVVASF SSLTKPDDPE LVAAVEKAIA SQP
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