Gene Pmen_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1762 
Symbol 
ID5109342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1936288 
End bp1936839 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID640502994 
Productglutathione peroxidase 
Protein accessionYP_001187258 
Protein GI146306793 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.533866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTC ATCGTCTTGC CTGCTCCTTG CTGCTCTCCA GCCTGGCATT GCCGGTGCTG 
GCCGCCGAAT GTCCGGCACT GCTGCAGGGA GAATTGCCCA AGCTGCGCGC CAAGGGTGAG
AGCGTCGAAC TCTGCCAGTT CGCCGGCAAG CCGCTGGTGG TGGTCAATAC CGCCAGCTTC
TGCGGCTTCA CCCCGCAATT CAAAGGGCTC GAAGCGCTGT ACCAGCGTTA CAAGGATCAG
GGCCTGGAAG TGCTGGGCGT GCCGTCCGAC GATTTCCGTC AGGAGGCCGA CAGCAGCGAG
GAAACCGCCA CCGTCTGCTA CGTCAACTAC GGCGTGACCT TCGCCATGAC CGAGCCGCAG
CCGGTTTCCG GGGGCAATGC CATCCCCCTG TTCAAGGGCC TGGCCGAGCA GAGCAGGGCG
CCGCGCTGGA ATTTCTTCAA ATATGTGGTC GACCGTCAGG GCAAGGTGGT GGCCAGTTTT
TCCAGCCTGA CCAAGCCGGA TGACCCCGAG CTGGTCGCCG CGGTGGAGAA GGCAATCGCC
TCGCAACCCT GA
 
Protein sequence
MSLHRLACSL LLSSLALPVL AAECPALLQG ELPKLRAKGE SVELCQFAGK PLVVVNTASF 
CGFTPQFKGL EALYQRYKDQ GLEVLGVPSD DFRQEADSSE ETATVCYVNY GVTFAMTEPQ
PVSGGNAIPL FKGLAEQSRA PRWNFFKYVV DRQGKVVASF SSLTKPDDPE LVAAVEKAIA
SQP