Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1732 |
Symbol | |
ID | 5109312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1908590 |
End bp | 1909927 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502963 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001187228 |
Protein GI | 146306763 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.268392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTGC CGGGTCGGCA CTCGCTGCTC TGGCGCCTGG CCGGAGCGCT TGCGCTGTTC TGCCTGCTGC TGGTCAGCCT CTATGCGGAT GTCGGTCGGC TGCTGGTCCA GGCCGCTTCC TATCTGCCCG AGTCGACTCG GCAGGTGCTG CGCGAGCATG CGCGCGAGGC CGAGGCGGCC TGGCGCGAGG GCGGGAGCGT CGGTGTGGAC ACCTTTCTCG AGCAGCTGCG CGAGCGCGAG GGAATCTGGG CGGCGGTGGT CGACGAGCAC AAGCACTCGC TGTCTTCGAT GCCGCTTGAC GAGGTGGAGG AGCAGCGTCT GGATTTCGTG CGCAGGCTGG ATTTCCCGGT GGGGCGACCG GGCAGCACGC CCACCTTCTA CGTGCCGTTC AGCGATGGCC AGGCGCGCCT GGTGCTGGAG CTGCCGCAGC GCCTGGATCC GCGGCAGTAC GTCGAGCTCT GGGAACTGCT GTTGCAGCGC CTGCTGCCGG CACTTCTGGC CGTGGCCCTG GCCATGCTGC TTTATCGTCT GCTGATCGCT CCGCTGGCGA TGCTGCGCAG GCAGGCCGCG GCGCTGAGTT CCGGCGATCT GTCGGCCAGG CTGGGTCCGC AGGTGACGCA ACGCAAGGAC GAGCTGGGCG AGCTAGCGCG CAGCTTCGAC CATATGGCCG AGCGTCTGCA GGGCACCGTG GCCTTTCAGC GTCAGCTGCT GCGCGACCTG TCCCACGAGC TGCGCACGCC GCTGGCGCGC CTGCGCGTGG CCGGCGAGAG CGAACAGGAC GTCGAGGCCC TGCGCCAGCG CCTGGCGCGT GAAGTGCTGC AAATGGAGAA ACTGGTGGGC GACGCCCTCG AGCTGGTCTG GCTGGACACC GAAAGGCCCC GCCTGCCGAG CGAGGAGGTG GACGTCGCCC GGCTGTGGGA CGTGCTGCGC GAGAATGCCG CGTTCGAAAC CGGCTGGCCC GTCGAGCGCA TGCCCTGCGA CCTGCCCACC GACTGCCGCG TGATCGGGCA TCTCAACGGC CTGGCGCAAG CGCTGGAGAA CATTCTGCGC AATGCCATTC GCCACTCGCC GCAGGGCGGC TCGGTACGCC TGGGCGGGCG GCGCGAGGCG GGTGATTGGC TGCTGTGGAT CGAGGATCAG GGGCCGGGAA TCGCCGAGAG CGAACTGGAA GCCATCTTCC GTCCCTTCAC CCGGCTCAGT GCCGCGCGGC CCGGTGGCGA CGGTTTCGGC CTGGGCCTGG CCATCGCCCG CAGCATGGTG GAGACGCAGG GCGGCCGCGT ATGGGCGCAC AACGGCGAGC CCGGGCTGCG CGTGCATATC CAGCTACCGG CGACCTGA
|
Protein sequence | MSLPGRHSLL WRLAGALALF CLLLVSLYAD VGRLLVQAAS YLPESTRQVL REHAREAEAA WREGGSVGVD TFLEQLRERE GIWAAVVDEH KHSLSSMPLD EVEEQRLDFV RRLDFPVGRP GSTPTFYVPF SDGQARLVLE LPQRLDPRQY VELWELLLQR LLPALLAVAL AMLLYRLLIA PLAMLRRQAA ALSSGDLSAR LGPQVTQRKD ELGELARSFD HMAERLQGTV AFQRQLLRDL SHELRTPLAR LRVAGESEQD VEALRQRLAR EVLQMEKLVG DALELVWLDT ERPRLPSEEV DVARLWDVLR ENAAFETGWP VERMPCDLPT DCRVIGHLNG LAQALENILR NAIRHSPQGG SVRLGGRREA GDWLLWIEDQ GPGIAESELE AIFRPFTRLS AARPGGDGFG LGLAIARSMV ETQGGRVWAH NGEPGLRVHI QLPAT
|
| |