| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1725 |
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| Symbol | |
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| ID | 5109305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1900578 |
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| End bp | 1901762 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502956 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_001187221 |
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| Protein GI | 146306756 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0243329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.192279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG CCGTCATCGT TTCCACCGCC CGCACACCGA TCGCCAAGGC GTTCCGTGGT
GCCTTCAACG ACCTCAAGGC GCCCAGCATG AGCGCTATCG CCATACAGGC CGCGGTGCAA
CGCGCCGGTA TCGAGCCTGC CGAGATCGAG GATGTGGTGA TGGGTACCGC GATGCAGGGC
GGCACTGCCT CCACCAACCT GGCGCGTCTG TCCCTGCTGG CCGCCGGGCT GCCGCTGTCG
GTCAGCGGGC AGACCATCGA CCGCCAGTGT GCCTCCGGCC TGATGGCGAT CTCCATCGCC
GCCAAGCAGA TCATGGTCGA CGGCATGGCC GTCACCATTG GCGCCGGTCA GGAGCAGATC
AGCCTGGTGC AGAACCACCA TATGCAGTGG GCCGGCGCGG ATGCGGACGC CCAGGTCATT
CGCCAGGCCG AGCATGCCTA CCTGCCCATG CTGCAAACCG CCGAGCTGGT GGCCAGGCGC
TATGGCATCA GCCGCGAAGC GCAGGATGCC TATGCCCTGG AATCGCAGCG GCGCACAGCC
GCGGCGCAGG ACGCCGGGCT GTTCGCCGAG GAGATAGTGG CGGTCAGCGC ACGCAAGAAA
CGGGTGGACA AGGAAACCGG CGCGCTCAGC TTCGAAGACG TCACCCTCCG CCTCGACGAG
GGCAATCGCC CGCAGACCGC GCTGGCCGAT TTGCAGGCTC TCAGGCCGGT GATCGAGGGT
GGCTGCATCA CCGCCGGCAA CGCCAGCCAG TTGTCAGATG GTGCCAGCGC CTGCGTGCTG
ATGAGCGGAG CCCTGGCCGC CCAGCGCGGG ATTGCCCCGC TGGGCCTGTA TCGCGGCATT
GCCGTGGCCG GTCTGGCGCC AGAGGAGATG GGCATAGGCC CGGTGTTCGC CGTGCCCAAG
CTGCTCCGCC AGCATGGCCT GACGGTCGAT GACATCGGCC TGTGGGAGCT CAACGAAGCC
TTCGCCTGCC AGGTGCTGTA CAGCGCCGAA AAACTGGGCA TCGATCCGAC CCGGCTCAAT
GTCAACGGTG GCGCCATCGC CATCGGCCAT CCCTACGGCA TGAGCGGCGC GCGCATGGTC
GGCCACGCCC TGCTGGAGGG TAAACGCCGT GGCGTGAAAT ACGTGGTGGT GACCATGTGC
GTAGGCGGCG GCATGGGCGC CGCCGGTCTG TTCGAAGTGC TGTAA
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| Protein sequence | MQDAVIVSTA RTPIAKAFRG AFNDLKAPSM SAIAIQAAVQ RAGIEPAEIE DVVMGTAMQG
GTASTNLARL SLLAAGLPLS VSGQTIDRQC ASGLMAISIA AKQIMVDGMA VTIGAGQEQI
SLVQNHHMQW AGADADAQVI RQAEHAYLPM LQTAELVARR YGISREAQDA YALESQRRTA
AAQDAGLFAE EIVAVSARKK RVDKETGALS FEDVTLRLDE GNRPQTALAD LQALRPVIEG
GCITAGNASQ LSDGASACVL MSGALAAQRG IAPLGLYRGI AVAGLAPEEM GIGPVFAVPK
LLRQHGLTVD DIGLWELNEA FACQVLYSAE KLGIDPTRLN VNGGAIAIGH PYGMSGARMV
GHALLEGKRR GVKYVVVTMC VGGGMGAAGL FEVL
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