| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1710 |
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| Symbol | nfrB |
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| ID | 5109684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1878726 |
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| End bp | 1880900 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502939 |
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| Product | bacteriophage N4 adsorption protein B |
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| Protein accession | YP_001187206 |
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| Protein GI | 146306741 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.164696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGG AACTGGTCGA TCTGCTGGCC TACCTGCTGT ACGGACTCAA GTACCTCGCC
ATTCTCCTCG CCGCGCTGAT GTTCCTGCTC GGTCTGGATG ACCTGTTCAT CGACCTGATG
TACTGGGGGC GAGCGCTGAT CCGTCGCTTT CGCATCTACA GCGGGCACAG CCGCGCCGAC
GAGAAGCTGC TCTACGGCAC CGCGGAAAAG CCCCTGGCGA TCATGGTGCC GGCCTGGCAC
GAGGTCGGTG TGGTCGGCGA GATGGCGCGC CTGGCGGCTT CCACGCTGGA CTACGAGAAC
TATCAGATCT TTGTCGGCAC CTACCCCAAT GACCCCGAGA CCCAGGCCGA CGTCGATGCC
GTATGCCTGC ATTACCCCAA CGTGCACAAG GTGGTGTGCG CACGACCGGG GCCGACCAGC
AAGGCCGACT GCCTGAACAA CGTGATCGAC GCCATTCTGC GTTTCGAGGC CGAGGCGCGG
GTGGAATTCG CCGGCTTTAT CCTGCACGAC GCCGAAGACG TGATTTCGCC GCTGGAGCTG
CGCCTGTTCA ACTACCTGCT GCCGAACAAG GACCTGATCC AGGTGCCGGT CTACCCCTAC
GCGCCGGAGT GGAGCGGTTT CACCGCCGGG CATTATGTCG ACGAGTTCGC CGAGAACCAT
GGCAAGGACG TGGTGGTGCG CGAGGCACTC ACCGGCCAGG TGCCCAGCGC CGGCGTCGGT
ACCTGTTTCA GTCGGCGTGC CATTGCCGCC CTGCTGGAGG ACGGCGACGG CATCGCCTTC
GACGTGCAGA GCCTGACCGA GGACTACGAC ATCGGCTTTC GCCTGAAGGC CAAGGGCATG
AAGTGCATCT TCGCCCGCTT TCCGGTCAGT GATCCCAAGC TGGCGCTGGT TTATGAATCC
GCGTTCGGCA TGAGCAAGCG CTTCTCTCAG GTGATCTGCG TGCGCGAGCA CTTTCCCCGC
ACCTGGTCGC ATGCCGTGCG GCAGAAATCA CGCTGGATCA CCGGCATCGT CTTTCAGGGC
ACCAGCAACC TCGGCTGGAG CACCCGCAAG ACGCTCAATT ACTTCCTCTG GCGCGACCGT
CGCGGCCTGC TCGCCTACCT GCTGAGCTTT CTGGTCAACC TGCTGTTTCT GGTGCTGCTG
TGCATGTGGC TGATCGGGCT GGCCTATCCC GAGGGCTGGC ATTTCCCCTC AATCCTTTCC
GACAGCCCAC TGCTCAGCAC GCTGCTGCTG CTCAACGGCC TGCTGCTGCT CAACCGCCTG
TTCCAGCGCG GCTACTTCGT CACCCGTTTC TACGGCATCG GCCAGGGCCT GCTGTCGGCG
CCGCGGATGA TGTGGAGCAA CTTCGTCAAC TTCTTCGCCA ACGTTCGCGC GCTCAAACAG
GTGCTGGAGA TGGGCGATTC GCGGCGCGTG GCCTGGGACA AGACCACCCA CGAATTCCCC
TCGCTCGGGC AAAGTCCGCA AACCCCTCTG GGGCGGCGCC TGGTCGAGCA GGGGGTGATC
AGCGAGGCGC AGCTCACCGA AGCCTTGACC AATCCGGTAC GTCGTCGCCT GGGCCGGCAG
TTGCTGCTCG ACGGTCTGCT CGACAGCCGG CAACTGGTGC AGGCCCTGGC CGAGCAGCTG
GACGAGCCCT GGGCGCCGCT CAATCCGTTT CGCGTCGACG AGCACCTGAT CCGCGCCTTC
CCGCGGCGCC TGGCGCTGCG CTACGCCGTT CTGCCGGTGG ACGAGGAGGG CGACACCCTG
GTGCTGGCCT GCGAGCGTCT GCTCAGTCAG GTCTCGGTCG GCGCCATCAG CCGTCAACTC
GGCCGCCCGG TACGCTGGCA ACTGGCGCCG CAGGGGCGGG TGACCCTGGG CCTGCGCTAC
TGGTACGGCG GCCGCCATGA CGGCGAGCAG AGCCGCACCC TGCTGGCCAC GCTCAAGCGC
CATGCCTATG ACGAGCAACT GCTGGAGGAA GTGTGCAAGC ACCAGGTGTT GTTTGGCGAT
CTGCTGCAGG TGCGCGGTTT GTTGCCGCCC TCGCTGTTCA ATCAGGCACT GATCGATTTC
GATCCGGAAG TTCATTCCCT CGGCCAGCAC CTGCTGCAAC GCGGGGTGAT CAGCGAGGAG
GTGTTGCAGC AGGCCCTGCG TGAGCAGGCC GAGGAGCAAC ACGAGAGCTA CCGGCTGGTG
GAGGCCCTGA CATGA
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| Protein sequence | MSLELVDLLA YLLYGLKYLA ILLAALMFLL GLDDLFIDLM YWGRALIRRF RIYSGHSRAD
EKLLYGTAEK PLAIMVPAWH EVGVVGEMAR LAASTLDYEN YQIFVGTYPN DPETQADVDA
VCLHYPNVHK VVCARPGPTS KADCLNNVID AILRFEAEAR VEFAGFILHD AEDVISPLEL
RLFNYLLPNK DLIQVPVYPY APEWSGFTAG HYVDEFAENH GKDVVVREAL TGQVPSAGVG
TCFSRRAIAA LLEDGDGIAF DVQSLTEDYD IGFRLKAKGM KCIFARFPVS DPKLALVYES
AFGMSKRFSQ VICVREHFPR TWSHAVRQKS RWITGIVFQG TSNLGWSTRK TLNYFLWRDR
RGLLAYLLSF LVNLLFLVLL CMWLIGLAYP EGWHFPSILS DSPLLSTLLL LNGLLLLNRL
FQRGYFVTRF YGIGQGLLSA PRMMWSNFVN FFANVRALKQ VLEMGDSRRV AWDKTTHEFP
SLGQSPQTPL GRRLVEQGVI SEAQLTEALT NPVRRRLGRQ LLLDGLLDSR QLVQALAEQL
DEPWAPLNPF RVDEHLIRAF PRRLALRYAV LPVDEEGDTL VLACERLLSQ VSVGAISRQL
GRPVRWQLAP QGRVTLGLRY WYGGRHDGEQ SRTLLATLKR HAYDEQLLEE VCKHQVLFGD
LLQVRGLLPP SLFNQALIDF DPEVHSLGQH LLQRGVISEE VLQQALREQA EEQHESYRLV
EALT
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