| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1678 |
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| Symbol | |
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| ID | 5109652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1843421 |
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| End bp | 1844731 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502907 |
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| Product | GDP-mannose 6-dehydrogenase |
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| Protein accession | YP_001187174 |
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| Protein GI | 146306709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.165535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.684751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCA CCATCTTTGG ATTGGGTTAT GTGGGCGCCG TGTGCGCCGG TTGCTTGTCG
GCTCGCGGCC ATGAGGTCAT CGGCGTCGAC GTATCGCAAA CCAAGATCGA CCTGATCAAC
CAAGGCAAAT CCCCCATCGT CGAACCCGGC CTCGCCGAGC TGCTCGAAGC CGGCGTCAAC
TCCGGTCGAC TGCGCGGCAC CACCGATGTG GCGGCAGCAG TCATGGCCAG CGAGCTGTCC
TTTATCGCCG TGGGTACGCC GAGCAAGCGC AATGGCGATC TCGACCTCGG CTACATGGAG
TCGGTGTGCA AGCAGATCGG TGCAGCCCTG CGCGACAAGC AGGACCGCCA CACCGTGGTC
GTGCGCAGCA CCGTCCTGCC AGGCACGGTT AAGAACGTGG TGATTCCGCT GATCGAAGCG
GCATCGGGCA AGAAAGCCGG TGTCGATTTC GGCGTGGCCA CCAACCCGGA GTTCCTCCGC
GAAAGCACCG CGATCAAGGA TTACGACTTC CCGGCGATGA CCGTGATCGG TGAACTGGAC
CAACAGTCCG GCGACCTGCT GCAGGAGCTG TACAGCGAAC TGGACGCACC GATCATCCGC
AAGTCCATCG AAGTGGCAGA GATGATCAAG TACACCTGCA ACGTCTGGCA CGCGGCCAAG
GTCACCTTCG CCAACGAGAT CGGCAACATC GCCAAGGCAG CCGGCGTCGA TGGTCGCGAG
GTGATGGATG TGGTCTGCCA GGATCACAAG CTCAATCTCT CCAAGTACTA CATGAAGCCC
GGCTTTGCCT TCGGCGGCTC GTGCCTGCCC AAGGACGTGC GCGCCCTCTC CTACCGTGCC
GGCAGCCTGG ACGTGGACGC GCCGCTGATC GGCTCGCTGA TGCGCAGCAA CGCCGCCCAG
GTGAAAAAAG CTTTCGACAT CGTCGCCAAC TACGACAAGC GTCGTATCGG CCTGCTGGGC
CTGAGCTTCA AGGCCGGCAC CGACGACCTG CGTGAAAGCC CGCTGGTGGA ACTGGCCGAA
ATGCTGATCG GCAAAGGCTA CGAGTTGCGC ATCTTCGACA GCAACGTCGA ATACGCCCGC
GTTTTCGGCG CGAACAAGGA ATATATCGAG TCGAAGATCC CCCACGTTTC CTCGCTGCTG
TGCAAGGAAC TCGACGAGGT GGTCGCGCAA TCCGACGTGC TGATCATCGG CAACGGCGAG
CAGCGCTTCG CCGAGGTCAT GGACAGCATC GGCGACGACA AACAGATCGT CGACCTGGTG
GGATTCATGG CGCATCCCAC CCAGGCCAAC CGGGAAGGAA TCTGCTGGTA G
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| Protein sequence | MRITIFGLGY VGAVCAGCLS ARGHEVIGVD VSQTKIDLIN QGKSPIVEPG LAELLEAGVN
SGRLRGTTDV AAAVMASELS FIAVGTPSKR NGDLDLGYME SVCKQIGAAL RDKQDRHTVV
VRSTVLPGTV KNVVIPLIEA ASGKKAGVDF GVATNPEFLR ESTAIKDYDF PAMTVIGELD
QQSGDLLQEL YSELDAPIIR KSIEVAEMIK YTCNVWHAAK VTFANEIGNI AKAAGVDGRE
VMDVVCQDHK LNLSKYYMKP GFAFGGSCLP KDVRALSYRA GSLDVDAPLI GSLMRSNAAQ
VKKAFDIVAN YDKRRIGLLG LSFKAGTDDL RESPLVELAE MLIGKGYELR IFDSNVEYAR
VFGANKEYIE SKIPHVSSLL CKELDEVVAQ SDVLIIGNGE QRFAEVMDSI GDDKQIVDLV
GFMAHPTQAN REGICW
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