Gene Pmen_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1654 
Symbol 
ID5109628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1816772 
End bp1817482 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID640502882 
Productmethyltransferase type 11 
Protein accessionYP_001187150 
Protein GI146306685 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.190237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG AAGAACTCAA GGCGCTGTTC GATCAACAGG CCGCAGGCTA CGACAAACAG 
TGGGCGGGCA TGGCGCCCAT CCGCAATACC CTGTACTTCC TGCTCGACTC GCTGTTCGTC
GGCCTGCCGC AAGAGGCGCG GATTCTCTGC GTCGGTGCCG GTACCGGAGC GGAGATCGCC
CATCTGGCCG AGCGCTTCCC CGACTGGCGC TTCACCGCCC TCGATCCCTC TGGCGCGATG
CTGGACGTGT GCCGCCAGCG CGCACGGCAG GGTGGCTTTC TCGACCGTTG CGATTTTCAT
CAGGGCTATC TCGAAACGCT GGAGGCAGGT CAGGCCTATG ACGGCGCCAC CTGCTTTCTG
GTGTCGCAGT TCTTCACCGA TGCACAGGCG CGTACCGGCC TCTTCCGGCA GATCGCGCAG
CGGCTGAAGC CTGGCGGGCT GCTGGCCAAT GCGGACCTCG CGGCCGACAC TCGGTCGCCT
GCCTACGAGC GGCTGCTGCA CAGCTGGATG ACCCTGATGT CTTCGGCCGG CGTCGACCCG
CAGATGCAGG AGCGGGCACG TGCGGCCTAT GCCACGGACG TGGCGGTGCT GCCGGCGCAG
CAGGTGGCCG ACATCATCCA GGCGGCCGGT TTTGCGGCGC CGGTGCAGTT TTTCCAGGCC
GGGCTGATGC ATGCCTGGAT CTGCCGGGCC GATGGTGCGG GCGAGGCGTA G
 
Protein sequence
MTEEELKALF DQQAAGYDKQ WAGMAPIRNT LYFLLDSLFV GLPQEARILC VGAGTGAEIA 
HLAERFPDWR FTALDPSGAM LDVCRQRARQ GGFLDRCDFH QGYLETLEAG QAYDGATCFL
VSQFFTDAQA RTGLFRQIAQ RLKPGGLLAN ADLAADTRSP AYERLLHSWM TLMSSAGVDP
QMQERARAAY ATDVAVLPAQ QVADIIQAAG FAAPVQFFQA GLMHAWICRA DGAGEA