Gene Pmen_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1643 
Symbol 
ID5109617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1804952 
End bp1805482 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID640502871 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001187139 
Protein GI146306674 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.163456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.836234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC ATCGCATCGA AACCGAACGC CTGACGCTGC GCCCACCGCA GCCGCAGGAT 
ACCGACGAGG TGCAGCGTCT GGCCGGCGAC TTCCGTATTG CCGATGTCAC CCGCAGCATT
CCCCATCCCT ATCCGCCCGA GCTCGCGCAG CAGTGGATCG AGCGCTGCAC GCAGGACTGG
CATGACGGCA AGGCGGCCAG CTTCGTGATC ATCGAGACGG GCAGCGGCCA ACTGGTCGGC
AGCATCACAC TCAAGGACAT CGGCCGCGGC GAGGCCGAGG TGGGTTACTG GATCGGCGTG
CCGTACTGGA GCCGTGGCTA TGCCAGCGAG GCCTGCAATG CACTGGTGGA GTTCGCCTTC
CGCCACCTGC GTCTGCGCCG GTTGCACGCC AGCCACCTGG CGCGCAACCC GCAGTCCGGG
CGCGTGTTGT TCAAGGCCGG CTTCCGCCAT CTGGGTCTGG GACATAGCGA GTGCGGCTGC
CAGGGCAAGC TGGAGCCGGT CGAACTCTAC GAGCGGGTTT CTGGCGATTG A
 
Protein sequence
MDEHRIETER LTLRPPQPQD TDEVQRLAGD FRIADVTRSI PHPYPPELAQ QWIERCTQDW 
HDGKAASFVI IETGSGQLVG SITLKDIGRG EAEVGYWIGV PYWSRGYASE ACNALVEFAF
RHLRLRRLHA SHLARNPQSG RVLFKAGFRH LGLGHSECGC QGKLEPVELY ERVSGD