| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1638 |
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| Symbol | |
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| ID | 5109612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1800635 |
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| End bp | 1801255 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502866 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001187134 |
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| Protein GI | 146306669 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.181149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAG AACCCCGTAA GGTCCGCGAA TTCCGTCGCC GCGAGCAAGA AATTCTCGAC
ACCGCGCTGA AACTCTTCCT CGAACAGGGT GAAGACAGCG TTACCGTCGA GATGATCGCT
GATGCGGTCG GTATCGGCAA AGGCACCATC TACAAGCACT TCAAGTCCAA GGCGGAGATC
TACCTGCGCC TGATGCTCGA CTACGAGCGC GATCTCAACG AGCTGCTGCA TTCGGCCGAC
GTGGATCGTG ACAAGGAAGC GCTGTCGCGC GCCTATTTCG AATTCCGCAT GCGCGACCCG
CAGCGCTATC GCCTGTTCGA CCGCCTGGAA GAGAAGGTGG TCAAGGGCAA TCAGGTGCCG
GAGATGGTCG AGCAGCTGCA CAAGATCCGC GCCTCCAACT TCGAGCGCCT GACCCAGCTG
ATCAAGGGCC GCATCGCCGA AGGCAAGCTG GAAGACGTGC CGCCGTACTT CCACTACTGC
GCCGCTTGGG CGCTGGTACA CGGCGCCGTG GCGCTGTACC ACTCGCCGTT CTGGAGCAAC
GTGCTTGAGG ATCAGGAAGG CTTCTTCCAG TTCCTCATGG ACATCGGCGT GCGCATGGGC
AACAAGCGCA AGCGCGACTG A
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| Protein sequence | MQKEPRKVRE FRRREQEILD TALKLFLEQG EDSVTVEMIA DAVGIGKGTI YKHFKSKAEI
YLRLMLDYER DLNELLHSAD VDRDKEALSR AYFEFRMRDP QRYRLFDRLE EKVVKGNQVP
EMVEQLHKIR ASNFERLTQL IKGRIAEGKL EDVPPYFHYC AAWALVHGAV ALYHSPFWSN
VLEDQEGFFQ FLMDIGVRMG NKRKRD
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