| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1592 |
|---|
| Symbol | |
|---|
| ID | 5109250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1754365 |
|---|
| End bp | 1754886 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640502820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187088 |
|---|
| Protein GI | 146306623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.722973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCAC TGCACCTGAT CGCCCTGCTG CTCTGCCTAG TGACACCGAG CGCCTTCGCC
GAACGCCTGT ATCAGGTCGA ACTGCTGGTG TTCCGCCAGG CAGGCGAGCC GGTCGTCGCG
CCCAAGGTGG CACCGGACGA CTGGGCAGGC ACGGCATTGC CCATCACCGG CAACGAACGC
CCTACCGCGC TCGATGGGGA GGCCGCCAAG CTCAATCCCG GCAACGGCTA TCAGTTGCTG
CTGCACAAGG CGTGGAGTCA GACCATCGGC AATTCGCCGA GTCGCGTGGC CGTCAGCAGC
GGTGAAGAGC ACTTCGGCCA CCACGCGGTA GAAGGCACCC TGAGCTTCAC CCAGGAGCGC
TTCGCCGATC TGGATCTGGA ACTGTGGATC AACCGCTTCA GCGCCGACGG CCTGCTGGAG
AGCAGCGAGC ACATGAAGGT CACCCAACGT CTGAAGGACA ACAGCCTGAC CTATCTGGAC
CACGGCGGTC TGGGCGCTCT GGTGCGCATC ACCCCACTCT GA
|
|---|
| Protein sequence | MRPLHLIALL LCLVTPSAFA ERLYQVELLV FRQAGEPVVA PKVAPDDWAG TALPITGNER
PTALDGEAAK LNPGNGYQLL LHKAWSQTIG NSPSRVAVSS GEEHFGHHAV EGTLSFTQER
FADLDLELWI NRFSADGLLE SSEHMKVTQR LKDNSLTYLD HGGLGALVRI TPL
|
|---|
| |