Gene Pmen_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1589 
Symbol 
ID5109247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1752019 
End bp1752543 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID640502817 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001187085 
Protein GI146306620 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.450343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC TCGATTTGCT GCATATCTCC ATTGCCGATC AGGCCCTGTA CGGTTTTCGT 
GCGGGGCGGC TGGTGCTGCG TCTGCCGGTT TCCACCGCAC TCAATGGCCC TGGAGAGCGC
AACGGTTCAG GCTGCACCCC GCGCGGTCTG CATCAGGTGC GCGCCAGGAT CGGCGCCGGC
CTGCCGCTGG CTGCGGTGCT CAGGGCAAGG CGCTGGACCG GGGAAATCTG GTCACCCCAG
CTGCATGAGC AGTTCCCTGG CCGCGACTGG ATACTCACCC GCATCCTCTG GCTCAGTGGC
CTGGAGCCCG GGCGCAATCG AGGCGCTCAG GTCGACAGTT TTCGCCGCTA TATTTACCTG
CATGGCACGC CTGATTGCGA ACCCATGGGT GTGCCGCTTT CGCATGGCTG CGTGCGCTTG
CGCAATGCAG ACATGCTGAC TCTGTTTGAT CGGGTGGCAC TGCACTGCCC GGTCAGGATC
GACGAGGCGC CCTGTCCGCA GTGGGCAGAG GCGGAACTCC TCTAA
 
Protein sequence
MSELDLLHIS IADQALYGFR AGRLVLRLPV STALNGPGER NGSGCTPRGL HQVRARIGAG 
LPLAAVLRAR RWTGEIWSPQ LHEQFPGRDW ILTRILWLSG LEPGRNRGAQ VDSFRRYIYL
HGTPDCEPMG VPLSHGCVRL RNADMLTLFD RVALHCPVRI DEAPCPQWAE AELL