| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1556 |
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| Symbol | |
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| ID | 5108506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1713688 |
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| End bp | 1714287 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502784 |
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| Product | DoxX family protein |
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| Protein accession | YP_001187052 |
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| Protein GI | 146306587 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2259] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.783773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0736532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT TGCTCAATCG CTTCCAGGAC GCGCTGGAGG CTACCCGGCG CCTGGATTTT
CTCGGCCCGC TGCTGCTGCG CCTGTATCTG GTGCCGGTGT TCTGGATGGC CGGCACGCAG
AAGCTCAAGG ACATCGACGC CACTGCCGCC TGGTTCGGCA ATCCGGACTG GGGGCTCGGC
CTGCCGTTTC CCGAGCTGCT GGCCTGGGCG GCAGCGCTGA CCGAGGCCGG TGGCGCCATT
CTGCTGCTGT TCGGCCTGGC AGTGCGCTGG ATCAGCATCC CGCTGATTGT CACCATGCTG
GTGGCGATCT TCGCCGTGCA CTGGCCCTAT GGCTGGCAGG CGATTGCCGA CCCGTCCGCG
CCGTTCGCCA ACGAGCGCGT GCTGGCGGCG GCGGAGAAAC TCGAGCGGGC GCGCAGCATC
CTGCGTGAGC ACGGTAATTA CGACTGGCTG ACCGCCAGTG GCAAGTTCGT GGTGCTGAAC
AATGGCATCG AGTTCGCCGC CACCTATCTG GTGATGCTGA TGGCGTTGTT CTTCAGCGGG
GCAGGGCGCT GGTTGAGTCT CGATTACTGG CTCGCGCGAC GTTTCCGAAC TCCGCGCTAA
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| Protein sequence | MIALLNRFQD ALEATRRLDF LGPLLLRLYL VPVFWMAGTQ KLKDIDATAA WFGNPDWGLG
LPFPELLAWA AALTEAGGAI LLLFGLAVRW ISIPLIVTML VAIFAVHWPY GWQAIADPSA
PFANERVLAA AEKLERARSI LREHGNYDWL TASGKFVVLN NGIEFAATYL VMLMALFFSG
AGRWLSLDYW LARRFRTPR
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