| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1543 |
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| Symbol | |
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| ID | 5108493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1702821 |
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| End bp | 1703558 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502771 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001187039 |
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| Protein GI | 146306574 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.807599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.747286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGC GCCTGCTGCC GTTCGCGGTA CTGTGCTTGC TCAGCCTGGC GGCCACCGCG
CAGGAACAAC GCCCGCTGCG CTTCTCGGTA ACCGAGGGCT GGGCCATGCC GATGATCCGC
ATCGAAGATG GCCGCGCCAC GTCCGGCATT CTCTACGACC TGCAGACGCG TCTGGCGGAG
AAGGTCGGCC GCCGCGCCGA GCTGCTGGTG ATGCCGCGCC TGCGCGTACA GCGCCTGCTG
GCCAGGGGCG AGATCGACGT GCGCTGCTAC GTCAACCCGA GCTGGCTCAG CGAACCGCAC
CATCAGTACA CCTGGAGCCA GCCGTTCATG GTGCAGCGCG ACCTGATCGT CGGGCGCCAC
GACGAAGCCG ACATCAGCCT GGCGCAGCTG CCCGGCGAGC GCCTGGGCAC CGTGCTGGGG
TTCAGCTACC CGCACCTGGA CGCCCTGTTT GCCAGCGGCC AGGTGCAGCG CGAAGATGCC
CGCACGCAGG AGCTGGTACT GGAGAAGCTG GAGGCCGGGC GCTATCGCTA CGCGGTCAGC
AACGAGCTGA CCCTGGCCTG GTTCAACCGC GACCTGCCGG AGGAAAAACG CCTGCGTGCA
CTGGCCGAGC TCAGCGCCGA TGCGCTTTCC TGCCTCGTGC GCGATGCGCC GGACGTGCCC
ACCCAGGCGC TGCTGCGAGC CCTGGTACAG ATGAAAGAGG ATGGCGAGCT CGACGCCATT
CTCTCCCGCT ATCGCTGA
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| Protein sequence | MRMRLLPFAV LCLLSLAATA QEQRPLRFSV TEGWAMPMIR IEDGRATSGI LYDLQTRLAE
KVGRRAELLV MPRLRVQRLL ARGEIDVRCY VNPSWLSEPH HQYTWSQPFM VQRDLIVGRH
DEADISLAQL PGERLGTVLG FSYPHLDALF ASGQVQREDA RTQELVLEKL EAGRYRYAVS
NELTLAWFNR DLPEEKRLRA LAELSADALS CLVRDAPDVP TQALLRALVQ MKEDGELDAI
LSRYR
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