Gene Pmen_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1531 
Symbol 
ID5108481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1693549 
End bp1694250 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID640502759 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001187027 
Protein GI146306562 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.195621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.284704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TCAGCTCGTT CGACATCACC CGCAAATGGC CCGCCCAGCA TCCCGAGCAC 
CTGCAGCTCT ACTCGCTGCC CACGCCCAAC GGCGTCAAGG TCTCGATCAT GCTGGAGGAA
ATCGGCCTGC CCTACGAGGC GCATCTGGTC AGCTTCGACA GCAACGATCA GTTCAGCCCG
GAGTTTCTCT CCCTGAGCCC CAACAACAAG ATTCCCGCCA TCCTCGACCC CAATGGCCCC
GAGGGTCAGC CGCTGGCGCT GTTCGAATCC GGGGCGATTC TGCTCTACCT CGCGGAAAAG
ACCGGCAAGT TGCTGTCGCA GTCGCCTGCG GTGCGCTATC AGACCATCCA GTGGCTGATG
TGGCAGATGG GCGGCGTCGG CCCGATGTTC GGCCAGCTCG GTTTCTTCCA CAAGTTCGCC
GGCAGCGAGT ACGAAGACAA GCGTCCGCGC GACCGTTACG TGGCCGAATC GGCGCGCCTG
CTCGGCGTGC TCGACCAGCA CCTGCAGGGC CGCGACTGGA TCGCCGGCGA GTACAGCATC
GCCGACATCG CCGTGTTCCC CTGGATTCGC AACCTGGTGG GCTTCTACGA AGCCGCCGAG
CTGGTGCAGT TCGAGCGCTT CGCCAACGTG CGCCGCGTGC TCGACGCCTT CCTCGCCCGC
CCGGCGGTGC AGCGCGGGCT GACCATTCCG GCACGCGGCT GA
 
Protein sequence
MTDLSSFDIT RKWPAQHPEH LQLYSLPTPN GVKVSIMLEE IGLPYEAHLV SFDSNDQFSP 
EFLSLSPNNK IPAILDPNGP EGQPLALFES GAILLYLAEK TGKLLSQSPA VRYQTIQWLM
WQMGGVGPMF GQLGFFHKFA GSEYEDKRPR DRYVAESARL LGVLDQHLQG RDWIAGEYSI
ADIAVFPWIR NLVGFYEAAE LVQFERFANV RRVLDAFLAR PAVQRGLTIP ARG