Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1531 |
Symbol | |
ID | 5108481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1693549 |
End bp | 1694250 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502759 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001187027 |
Protein GI | 146306562 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.195621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.284704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TCAGCTCGTT CGACATCACC CGCAAATGGC CCGCCCAGCA TCCCGAGCAC CTGCAGCTCT ACTCGCTGCC CACGCCCAAC GGCGTCAAGG TCTCGATCAT GCTGGAGGAA ATCGGCCTGC CCTACGAGGC GCATCTGGTC AGCTTCGACA GCAACGATCA GTTCAGCCCG GAGTTTCTCT CCCTGAGCCC CAACAACAAG ATTCCCGCCA TCCTCGACCC CAATGGCCCC GAGGGTCAGC CGCTGGCGCT GTTCGAATCC GGGGCGATTC TGCTCTACCT CGCGGAAAAG ACCGGCAAGT TGCTGTCGCA GTCGCCTGCG GTGCGCTATC AGACCATCCA GTGGCTGATG TGGCAGATGG GCGGCGTCGG CCCGATGTTC GGCCAGCTCG GTTTCTTCCA CAAGTTCGCC GGCAGCGAGT ACGAAGACAA GCGTCCGCGC GACCGTTACG TGGCCGAATC GGCGCGCCTG CTCGGCGTGC TCGACCAGCA CCTGCAGGGC CGCGACTGGA TCGCCGGCGA GTACAGCATC GCCGACATCG CCGTGTTCCC CTGGATTCGC AACCTGGTGG GCTTCTACGA AGCCGCCGAG CTGGTGCAGT TCGAGCGCTT CGCCAACGTG CGCCGCGTGC TCGACGCCTT CCTCGCCCGC CCGGCGGTGC AGCGCGGGCT GACCATTCCG GCACGCGGCT GA
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Protein sequence | MTDLSSFDIT RKWPAQHPEH LQLYSLPTPN GVKVSIMLEE IGLPYEAHLV SFDSNDQFSP EFLSLSPNNK IPAILDPNGP EGQPLALFES GAILLYLAEK TGKLLSQSPA VRYQTIQWLM WQMGGVGPMF GQLGFFHKFA GSEYEDKRPR DRYVAESARL LGVLDQHLQG RDWIAGEYSI ADIAVFPWIR NLVGFYEAAE LVQFERFANV RRVLDAFLAR PAVQRGLTIP ARG
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