| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1528 |
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| Symbol | |
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| ID | 5108478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1689869 |
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| End bp | 1690792 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502756 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187024 |
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| Protein GI | 146306559 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.442273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.763545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGC CGAACCTCTC CGACATCGCC CTGTTCGCCG CCGTGGTCGA GGCCGGCGGT
TTTCGTGCGG CGGCGCAGCG CCGCGGCACC TCAGCCTCGT CGCTCAGCGA CTGCGTGCGC
CGCCTGGAAC AGGAGCTGGG CGTGCGCCTG CTCAACCGCA CCACCCGTGG CCTGACGCCG
ACGGAAATCG GTGCGCGTCT GCTGGAGCGC CTGCGCCCGG CGCTGGACGA GATCAACGCC
GCGCTGAACG ACCTGCAGGA AGATCCGCAG CATCCGGTCG GCTCGCTGCG CCTGCATGTA
CCGGGCGTGA TCGCGCGGCA CATCCTGCCG CCGCTGCTGG ACGGTTTTCT CGCGCGCTAC
CCGGGTATCG CGCTGGAAGT GAACATGGAC AACACCTTCA TCGACGTGAT CGGCGCCGGT
TACGACGCCG GCATCCGCTA CGAGGAAAGC CTGGCCAAGG ACATGATCGC CATCCCCATC
GGGCCGCGCC GGCAGTGTTT CATGGCGGTT GCCGCGCCCA GCTATCTGCA GCGCCACGGC
ACGCCGCAGC ATCCCGGCGA ACTGAGCGAG CACCGCCTGC TCGGCTACCG CTTCGCCAGC
GGCAAGCTGG GTGTCTGGGA GTTCGAGCAG GATGGACGCA CCTTGCGCAT CGCCCCGGAG
GGCAGGTTGG TCAGCTCATC GCAGGACCTG CTGATCGCTG CGGCCTGCGC CGGCCACGGC
ATCCTCTACA CCTTCGAGGA ATACATCGCC GCGCACCTCG CCAGCGGTCA GCTGCAACCC
ATCCTGCATG ACTGGTGGCA GCACTTCGAA GGGCCCTATC TGTACTACCA CAGCAGGCGC
CATGTGCCGG CGCCGCTGCG CGCCTTCGTC GACTACGTGA AGGCCCTGAA CACACCCGAC
CATTCGTCTC AAAGCCCGAA ATAG
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| Protein sequence | MRQPNLSDIA LFAAVVEAGG FRAAAQRRGT SASSLSDCVR RLEQELGVRL LNRTTRGLTP
TEIGARLLER LRPALDEINA ALNDLQEDPQ HPVGSLRLHV PGVIARHILP PLLDGFLARY
PGIALEVNMD NTFIDVIGAG YDAGIRYEES LAKDMIAIPI GPRRQCFMAV AAPSYLQRHG
TPQHPGELSE HRLLGYRFAS GKLGVWEFEQ DGRTLRIAPE GRLVSSSQDL LIAAACAGHG
ILYTFEEYIA AHLASGQLQP ILHDWWQHFE GPYLYYHSRR HVPAPLRAFV DYVKALNTPD
HSSQSPK
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