| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1526 |
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| Symbol | |
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| ID | 5108476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1687971 |
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| End bp | 1688528 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502754 |
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| Product | periplasmic protein-like protein |
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| Protein accession | YP_001187022 |
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| Protein GI | 146306557 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0352336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.908264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC AGCTTCTGCG CTTCGCCCTG ATCGGCACTG CCCTGCTCGC CCCGCTCCAT
GCCCAGGCCA GGGTTGAGGT CGAGTCCCAC GACGGCCTGC TGGCGGCGAA GATTTCCGAA
GAGATAGTGC CCGGCGACTA CGAAAAGTTG CTCCAGGGCC TGCGCGCCCA TCCCGGCAAG
CACAAGCGCA AGGTCGTGCT GCTCGACAGC ATCGGCGGCA GCGCGCCGGA GGCCATTCGC
ATGGGCCGCC TGCTGCGGGA AACCGGCTTC GAGGCGCTGG TGCCTTTCGG TGGCATCTGC
CAGGGCAGCT GCATCTACCT GCTCGCCGCC GGCACCAAGC GCACCGTCAA CGGCCACGTG
GCCCTGCGCC GCCCGCCCTT CCCTGCCGGC GACTCGGCCC AGGCGCAGGC CGCCCACGGC
CGCGAGCATT TCAGCCCGGC CAAGTACTTT CGCGACATGG GCGTCGATAT CTCCCTGGCC
GAAGACATCT ACAAGGTGGC GCCTGGCCGC CTGCAGCTGC TGACCCGGGA CGACCTGGCG
CGCTATCGGC TGAAATGA
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| Protein sequence | MIAQLLRFAL IGTALLAPLH AQARVEVESH DGLLAAKISE EIVPGDYEKL LQGLRAHPGK
HKRKVVLLDS IGGSAPEAIR MGRLLRETGF EALVPFGGIC QGSCIYLLAA GTKRTVNGHV
ALRRPPFPAG DSAQAQAAHG REHFSPAKYF RDMGVDISLA EDIYKVAPGR LQLLTRDDLA
RYRLK
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