| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1517 |
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| Symbol | |
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| ID | 5108467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1678733 |
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| End bp | 1679932 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502745 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001187013 |
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| Protein GI | 146306548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.305903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.799491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGA CCGCTCCAAT GCCTTCGGTC AGCCGCGTTC GCCTGGTCGG CGCCATGGGG
ATTGGCCAGA TACTGGCCTG GAGTTCGACC TATTACCTGC CTGCCGTGCT GGCCAGCCCC
ATTGCGCAGG CAACGGGCTG GTCGATCACC CGCGTGGTGA TGGGGCTTTC CCTCGGCTTG
CTGGTTGCCG GAGCCTGTTC GCCCCGGGTC GGCCGCATGA TCGACCGTCA CGGCGGCCGC
TCGACGCTGG CGGCAAGCTC GATTCTCATG GCGCTGGGTC TCGCCCTCAT GGGCGCGGCC
CAACATCTGC CGGTGTACTA CCTGGCCTGG ACCATCATCG GCCTGGCCAT GGCGGCGGGC
CTGTACGACG CCGCCTTCGC CACGCTGGGC AGCCTGCTGG GCAGCGCGGC ACGCTCCTCC
ATCAGCGGCC TGACGCTGCT GGGCGGGTTC GCCAGCACCC TGGGGTGGCC CTTGCTCGCC
TATCTGGAAC ATCAACTGGG CTGGCGAGGC GCATGCTTCG TGCTGGCCGG TGCCCATTTG
GCAGTGGGCC TGCCGATTTA CCTGCTTTTC GTGCCGAAGG CTCCAACCGC CCCTGCCCCA
GCCAGCAGCC GCACGCAGGC GAACGCAGAA GCCGGCCAAC CGCTCGCCTA CCGCCAGCTA
TTCCTCCTGC TCGCGCTGCT GCTGACCCTG CAATCATTGG TGGCGTCGAC CGTATCGGTG
CATCTGCTGG ATATGCTCAA GTTGCTCGGC ATGGCCACTG CTTCAGCCCT GGCCATCGGG
ATGATCATGG GGCCGGCGCA GGTTGCCGGG CGCATCGCTG AATTCACCTG GGGTCAGGGC
CTTCACCCGA CCTGGGCCAC GCGCCTGGGT GTTCTGCTCT GCCTGGTTGG CATCCTGCTG
CTTGTACCGG CTCAGGCCTG GCTGGCGTTC GTCGCCATCG CCCTGTATGG CGCAGGCAAC
GGCATCCTGA CCATCACGCG CGGGACCTTG CCGCTGGTGC TGTTCGGCCC CACCGGTTAT
GGCGCGCGCA TGGGCCTGCT CGCCAGGCCC ATGCTCGTTG CGCAGGCAGC GGGACCGATA
GGCGCAGCGA TGATCCTGGA TGCCTTCAGC GCCGAAGCCT TGCTGATGGT GCTGGCCAGC
CTTGCCCTGG CAGGGCTGCT GGCCAGCAGT CGGCTGCCCA CGCGCGAAGC AGGCCCCTGA
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| Protein sequence | MPQTAPMPSV SRVRLVGAMG IGQILAWSST YYLPAVLASP IAQATGWSIT RVVMGLSLGL
LVAGACSPRV GRMIDRHGGR STLAASSILM ALGLALMGAA QHLPVYYLAW TIIGLAMAAG
LYDAAFATLG SLLGSAARSS ISGLTLLGGF ASTLGWPLLA YLEHQLGWRG ACFVLAGAHL
AVGLPIYLLF VPKAPTAPAP ASSRTQANAE AGQPLAYRQL FLLLALLLTL QSLVASTVSV
HLLDMLKLLG MATASALAIG MIMGPAQVAG RIAEFTWGQG LHPTWATRLG VLLCLVGILL
LVPAQAWLAF VAIALYGAGN GILTITRGTL PLVLFGPTGY GARMGLLARP MLVAQAAGPI
GAAMILDAFS AEALLMVLAS LALAGLLASS RLPTREAGP
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