| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1515 |
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| Symbol | |
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| ID | 5108465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1677471 |
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| End bp | 1678085 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502743 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001187011 |
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| Protein GI | 146306546 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.156779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.419561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCG CCATTCTGAC CTTCGAGGGG TTCAACGAAC TCGACTCGCT GATCGCCTTC
GCCATTCTCA ACCGCATTCG CCGGCCCGAC TGGCGTGTCA GCATCGCCAG CCCAGTTGCA
CGCGTGACAT CCATGAACGG GTTGGTGATC GATAGCCACA TCGACCTGCA GCAGGCCTGC
GCGGCCGATG CGGTGATCGT CGGCAGTGGC ATGCGCACCC GTGAGGTGGC GGCGGATGAA
GCGTTGATGA CGCAGCTGCG CCTCGACCCG GCGCGGCAAC TGCTGGCGGC GCAGTGTTCC
GGCACGCTGG TGCTGGCCCG GCTCGGCTTG CTCGACGGCG TTGCCGCCTG TACCGATCTG
ATCAGCAAAC CCTGGGTGGA GGCAGCGGGC GTGGCTGTAC TCGATCAGCC ACTGTTCGCT
CGTGACAATG TCGCCACGGC GGGCGGCTGC CTGGCGTCGA CCTATCTCGC CGCCTGGGTC
ATCGCCCGTC TGGTCGGCCT CGACGAGGCG CGCCAGGCGC TGCACTACGT GGCGCCGGTG
GGTGAGAAGG CGCAGTACCT GGCGGGGGCG ATGGCAGCGA TCAGTCCTTA TCTTCATGAC
CGTACAGAGG CGTGA
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| Protein sequence | MHIAILTFEG FNELDSLIAF AILNRIRRPD WRVSIASPVA RVTSMNGLVI DSHIDLQQAC
AADAVIVGSG MRTREVAADE ALMTQLRLDP ARQLLAAQCS GTLVLARLGL LDGVAACTDL
ISKPWVEAAG VAVLDQPLFA RDNVATAGGC LASTYLAAWV IARLVGLDEA RQALHYVAPV
GEKAQYLAGA MAAISPYLHD RTEA
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