| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1438 |
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| Symbol | |
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| ID | 5109727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1599939 |
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| End bp | 1601306 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502667 |
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| Product | gluconate transporter |
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| Protein accession | YP_001186935 |
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| Protein GI | 146306470 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTGG TCCTGATTCT GCTGGCACTG ATCGCGTTCA TCGTGCTGTC CACCACCCGA
TTGAAGCTGC ATCCCTTTCT CGCCCTGCTG GCCGCGGCGC TGATCGCCGG TTTCGCCTAC
CAGCTGCCCA GTGGCGAAAT CATCAAGACC ATCACCGCCG GTTTTGGCGG CATCCTCGGT
TACATCGGCA TCGTCATCGT GCTCGGTACC ATCATCGGGG TGATGCTCGA GCGCAGCGGT
GCGGCCATCA CCATGGCCGA GACGGTGATC CGTCTGTTGG GCCAGCGCTT TCCCACCCTG
ACCCTGTCGA TCATCGGCTA TCTGGTGTCG ATTCCGGTGT TCTGCGACTC CGGCTACGTC
ATTCTCAATT CGCTGAAAAA TGCCCTGGCC GCGCGCATGA AGGTTTCCGT GGTGGCCATG
AGCGTGGCCC TGGCTACCGG CCTGTACGCC ACCCACACCT TCGTGCCACC GACGCCGGGG
CCGATCGCCG CCGCCGGTAA CCTGGGCCTG GAAACCTCGC TGGGCCTGGT GATTCTGGTG
GGCCTGCTGG TGGCTGCGGT CACCGCGGTG GCAGGCATGC TGTGGGCCAA TCGTTTCCTC
AAGCAGGACG ACCACGAGCT GCTGGAAGAA GCGCCCAGCG AGCTGCTCGC CGACAATGTC
GATTTCGCTG CGCTGCGTGC CCGCTACGGC AAACTGCCCA GTGCCTGGAA GGCGTTCTCG
CCGATCTTCG TGCCCATCGT GCTGATCTGC CTCGGCTCGG TCGCGGCCTT TCCCAGCAAG
CCGCTCGGCG AGGGCGTGCT GTTCGAGCTG CTGAGCTTCC TCGGCCAGCC GGTCGCCGCC
TTGCTGGTCG GCCTGGTGCT GGCCTGCTCG CTGCTCAAGG GTGAGGGCAA GCGGCAGCAA
CTGCACGATC ACGTGGCGCA TGGCCTCAAG GAAGCCGCGC CGATTCTGCT GATCACCGGC
GCCGGTGGCG CTTTCGGCGC GATTCTCAAG GCCACCGCGC TGACCGGCTA TCTGGGCGAC
ACCCTGTCGG CTCTGGGCAT CGGCCTGTTC ATGCCGTTCC TGGTGGCCGC CGCCCTGAAG
AGCGCGCAAG GTTCGTCCAC CGTGGCCCTG GTCACTACCT CGGCCATGGT GGCGCCGCTG
CTGGGCAACC TGGGTCTGGA CAGCGAGATG GGCCGCGTGC TGACGGTGAT GGCCATCGGT
GCCGGTGCCA TGACCGTATC CCACGCCAAC GACAGCTTCT TCTGGGTGGT GACCCAGTTC
AGCCGCATGA AAGTGGCCAC CGCCTATCGC GCCCAGACCA TGGCCACCCT GGTTCAGGGC
GTGGTCGGCA TGCTGGCCGT CTGGCTGCTC AGCCTGGTTC TGCTGTAA
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| Protein sequence | MGLVLILLAL IAFIVLSTTR LKLHPFLALL AAALIAGFAY QLPSGEIIKT ITAGFGGILG
YIGIVIVLGT IIGVMLERSG AAITMAETVI RLLGQRFPTL TLSIIGYLVS IPVFCDSGYV
ILNSLKNALA ARMKVSVVAM SVALATGLYA THTFVPPTPG PIAAAGNLGL ETSLGLVILV
GLLVAAVTAV AGMLWANRFL KQDDHELLEE APSELLADNV DFAALRARYG KLPSAWKAFS
PIFVPIVLIC LGSVAAFPSK PLGEGVLFEL LSFLGQPVAA LLVGLVLACS LLKGEGKRQQ
LHDHVAHGLK EAAPILLITG AGGAFGAILK ATALTGYLGD TLSALGIGLF MPFLVAAALK
SAQGSSTVAL VTTSAMVAPL LGNLGLDSEM GRVLTVMAIG AGAMTVSHAN DSFFWVVTQF
SRMKVATAYR AQTMATLVQG VVGMLAVWLL SLVLL
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