| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1437 |
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| Symbol | |
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| ID | 5109726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1598629 |
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| End bp | 1599744 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502666 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_001186934 |
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| Protein GI | 146306469 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC TCGACTCCAC CCTGGCCCAG CACATCGTCG ATCGTGCCAT GGCCATCCTG
CCGCACAACA TCAACGTCAT GGACGCCCAG GGAATGATCA TCGGCAGCGG TGATCCCAGC
CGTCTGCATA CCCGTCACGA GGGGGCGCAA CTGGTGCTGG CCAACCGCCG CGTGGTGGAG
ATCGACGCCC AGGCCGCAGC CTGCCTGCGT GGCGTGAAGC CCGGGGTCAA TCTGCCGCTG
CTGCATGCCG AGCAACTGAT CGGCGTGCTG GGGATCACCG GCGATCCGGA CATCGTCAGG
CCTTACGCCG AGCTGGTACG CATGGCTGCC GAAATGCTGG TCGAGCACCG CGTGCTGCAG
GCCGAGCGGC ACTGGCAGCG GCATCAGCAG GAGGCCTGGC TGCGCCAGCT GCTGGATCCG
CAGCAGCGGC TCAGCAGCCT GGAAGTCGAG GCCGAACGCC TGGGGCTGCA GCTCACCTGG
CCGCGGCAGA TATGCCTGCT GCGTCTGGTG GAGGAGGGCG ATCCGCTGCC GCGCCAGGCA
CGTCTGCTCG CCGCGCTGGG TAGCAAGAGC GAGCATCTGC TGGCGCCGCT CGGGCGCCAC
GAGCTCTTGT GGTGCAGGCC GTACAGCGCC GGTCGCGATG ACCATGCCTG GTTGGCGCAG
GCCGATGAGC GTGAGTGGGG CATACGCTCG CTGGCGCTCA GCGACCCGCT GCACGACCTG
GCCGAGCTGC GTCAGGCCAG CCTGGTGCTG CGCGACCTGC AGGCCTATGG CCTGGCGCGT
TTTCCGGAGC GTCGCCTGTT GCCCCTGGAA GAGCTGCGTC TGCCGACCTT GCTCCATGCT
CAGCGCCACA GCTGGTTGCT GCAGGGCTGG CTGGCGCCGC TGCGCCGGGT GTTGGCGCAG
GACCCGCACG GCACCCTGCG CGCCACGCTG GAGGCCTGGT GCGCGCATGA CGGCCAGGTG
CAGCTGTGCG CGCAGGCGCT GGGCATCCAC CGCAACACCC TGCGTTATCG TCTGGAGCGT
ATCGGCGAGC TCAGCGGACT GGACCTCGAT CGCCTGGATC AGCGCCTGCA ACTGTCGCTC
GGGTTGGGCC TGCTGGAGTC GGGCGAGGCC GATTGA
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| Protein sequence | MLELDSTLAQ HIVDRAMAIL PHNINVMDAQ GMIIGSGDPS RLHTRHEGAQ LVLANRRVVE
IDAQAAACLR GVKPGVNLPL LHAEQLIGVL GITGDPDIVR PYAELVRMAA EMLVEHRVLQ
AERHWQRHQQ EAWLRQLLDP QQRLSSLEVE AERLGLQLTW PRQICLLRLV EEGDPLPRQA
RLLAALGSKS EHLLAPLGRH ELLWCRPYSA GRDDHAWLAQ ADEREWGIRS LALSDPLHDL
AELRQASLVL RDLQAYGLAR FPERRLLPLE ELRLPTLLHA QRHSWLLQGW LAPLRRVLAQ
DPHGTLRATL EAWCAHDGQV QLCAQALGIH RNTLRYRLER IGELSGLDLD RLDQRLQLSL
GLGLLESGEA D
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