Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1424 |
Symbol | |
ID | 5109713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1586080 |
End bp | 1586469 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640502653 |
Product | hypothetical protein |
Protein accession | YP_001186921 |
Protein GI | 146306456 |
COG category | [S] Function unknown |
COG ID | [COG3776] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0127503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC GCCCTCCAGA CTGGTGGTCC GGGCCGCGAG CGGTTAACGT GCTGCGCTAC TGGAAAACCG AGCGAGAGGG CGGGATGAAA GCACTGTTGA TTGCTGGCAA GGCGTTGACC TTGTCGTTCT GGCTGGTATT TGGCGCGGCC CTGGTCAAAT GGGTGGGGCC CCCCTTCGAA CAACTGATCC ACCTGTTGGC GGCATTCCTC CTGGTTCTGC ATGGGGTGCA GCTCTGGCTG TTCGCCGACA CCTTGACCGG GCGCAGCAAT CCCTGGCTCG ACCGGTTGCA GGTACTGCTG TTCGGCATCT TCCACCTTTA CCCGCTGAAG CCGACGGTGG TGGCCACCGC CGAGGCATCG GCCGCAGCCG AGGAGGCGGC GCATGCGTAA
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Protein sequence | MQKRPPDWWS GPRAVNVLRY WKTEREGGMK ALLIAGKALT LSFWLVFGAA LVKWVGPPFE QLIHLLAAFL LVLHGVQLWL FADTLTGRSN PWLDRLQVLL FGIFHLYPLK PTVVATAEAS AAAEEAAHA
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