Gene Pmen_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1424 
Symbol 
ID5109713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1586080 
End bp1586469 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID640502653 
Producthypothetical protein 
Protein accessionYP_001186921 
Protein GI146306456 
COG category[S] Function unknown 
COG ID[COG3776] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0127503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC GCCCTCCAGA CTGGTGGTCC GGGCCGCGAG CGGTTAACGT GCTGCGCTAC 
TGGAAAACCG AGCGAGAGGG CGGGATGAAA GCACTGTTGA TTGCTGGCAA GGCGTTGACC
TTGTCGTTCT GGCTGGTATT TGGCGCGGCC CTGGTCAAAT GGGTGGGGCC CCCCTTCGAA
CAACTGATCC ACCTGTTGGC GGCATTCCTC CTGGTTCTGC ATGGGGTGCA GCTCTGGCTG
TTCGCCGACA CCTTGACCGG GCGCAGCAAT CCCTGGCTCG ACCGGTTGCA GGTACTGCTG
TTCGGCATCT TCCACCTTTA CCCGCTGAAG CCGACGGTGG TGGCCACCGC CGAGGCATCG
GCCGCAGCCG AGGAGGCGGC GCATGCGTAA
 
Protein sequence
MQKRPPDWWS GPRAVNVLRY WKTEREGGMK ALLIAGKALT LSFWLVFGAA LVKWVGPPFE 
QLIHLLAAFL LVLHGVQLWL FADTLTGRSN PWLDRLQVLL FGIFHLYPLK PTVVATAEAS
AAAEEAAHA