Gene Pmen_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1415 
Symbol 
ID5109704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1580153 
End bp1580617 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID640502644 
Producthypothetical protein 
Protein accessionYP_001186912 
Protein GI146306447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.303637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TAACGCTCAC GCTCGTGCTG GTCGGTCTGC TGCTGATCGC TGCGCTGGCG 
GCATATGCCT GGCACCTGTG GCGCCGCGTC TGGGCGCAGC AGGAAAGCCA GGCCGCCGCC
GAGCAGGAAC GCCGGCAGCG GCTCGGCGGT GACCTGAACA TCCTCGCCAG CAGCCTGCTG
GACGAGCAGC TGCCGCTGAT CGAAGGTGCC ATCCGCATCA AGGTGCTGCT CGACAACTAC
GACAGCGCCC TGAGCAACGA TGCCCGCTGC CAGGTCTTTC ACCAGCTGTT CGAAGCCACC
GCCGACGTGC CCACTCACGC CGCCTGGAAG GCGCTGGACA AGCCCGCACG CCGACGCTTC
GAGAAGCGCT TCACCGAGCT GGAGCTGCAA CACAAGGCCG CCGCCCGCAC GGCAGCGCGC
TGGCTGCTCG ACGAAGGGCT CGCCAGCCGG CCGGACAGGG CCTGA
 
Protein sequence
MSTITLTLVL VGLLLIAALA AYAWHLWRRV WAQQESQAAA EQERRQRLGG DLNILASSLL 
DEQLPLIEGA IRIKVLLDNY DSALSNDARC QVFHQLFEAT ADVPTHAAWK ALDKPARRRF
EKRFTELELQ HKAAARTAAR WLLDEGLASR PDRA