| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1379 |
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| Symbol | |
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| ID | 5109432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1545274 |
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| End bp | 1545774 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502608 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001186876 |
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| Protein GI | 146306411 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.23835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.28314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTC ATCAGGCAAC TGGATGCAGC TTGCCCATGC CCACGCGGCG GTCGAGACTC
TCTCGCACAG CCCGCGCAGG AGGTCACATG AGCGACTCCA TCGGCATCAG CCGCGAGCGT
CTGGAACAGG CGCTCGCCCA CTCCACCTTC GCCCAGCTGC TCGGCGCCGA GCTGCTCGAC
TTCGCGCCGG GCCGGGTCAG CCTGCAGGTA CGCAGCCGTC CCGACCTGTG CCAGCACCAT
GGCTACATGC ACGGCGCGGT GGTCGGTTTC ATGGTCGACA GCGGTTGCGC CTGGGCCGCG
GCGTCGATGG TCGGCGACGT GGTCACCAGC GAATACAAGC TCAACCTGCT TGCCCCGGCG
CTCGGCGAAC GCCTGCTGTG CCGCGCCGAA GTGCTCAAGG CCGGGCAGCG CCAGGCGGTC
TGCCGAGCCG ATGTGTTCGC CCTGAAGGAT GGCCAGGAGA AGCTGGTGGC CACCGGCCTG
GCGACCATCG CGCGGGTGTA G
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| Protein sequence | MQPHQATGCS LPMPTRRSRL SRTARAGGHM SDSIGISRER LEQALAHSTF AQLLGAELLD
FAPGRVSLQV RSRPDLCQHH GYMHGAVVGF MVDSGCAWAA ASMVGDVVTS EYKLNLLAPA
LGERLLCRAE VLKAGQRQAV CRADVFALKD GQEKLVATGL ATIARV
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