| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1365 |
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| Symbol | |
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| ID | 5109418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1529173 |
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| End bp | 1529988 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502594 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186862 |
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| Protein GI | 146306397 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.108142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0447378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA TCAATCGCCA CCCGGATCGC AGCGGCCGCC TGCTGCTGAT CCTGCTGCCC
TTCGCCCTGC TGCTGTTCGT CTACTTCAGT GCCTCGACCA CCCGCCTGGC CGAAAACCCC
AACGACAAGC TGCTGCCCAG CGCCAGCCAG ATGGTCGATG CCATCGACCG CCTGGCCTTC
ACCGAGGACA AACGCAGCGG CCAGTACCTG TTCTGGCAGG ACACCGCCTC CAGCCTGCAA
CGCCTGGGCA TGGGCCTGGG CATCGCCGCG CTGCTGGGCC TGGTGCTGGG CATCGCCGCC
GGCAGCATCC CGCTGTTCGG CGCACCGCTG TCACCGCTGC TCACGGTGCT GTCGATGATT
CCGCCGCTGG CCATCCTGCC GATCCTGTTC ATCGTCTTCG GCCTGGGCGA GCTGTCCAAG
GTGATGCTGA TCGCCATCGG CATCACCCCC TGCATCGCCC GCGATATCGA ACAGCGCGCC
CGCGAGATTC CCGGCGAGCT GCTGATCAAG GCGCAGACCC TCGGCGCCAA CACCTGGACG
CTGATCCTGC GCCTGGTGCT GCCGCAGCTG CTGCCGCGCC TGCTGATCTC GCTGCGCCTG
ATGCTCGGCT CGGCCTGGCT GTTTCTGATC GCCGCCGAGG CCATCGCCTC GACCGACGGC
CTCGGCTATC GCATCTTCCT GGTGCGCCGT TACATGGCCA TGGACGTGAT CCTGCCCTAC
GTGGTGTGGA TCACCCTGCT GGCCTGGCTG ATGGACCTGG GCCTGCGTCA GGTGCTGCGC
CTGTGCTTCC CCTGGCATGA AGGAGGCAAG GCATGA
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| Protein sequence | MRLINRHPDR SGRLLLILLP FALLLFVYFS ASTTRLAENP NDKLLPSASQ MVDAIDRLAF
TEDKRSGQYL FWQDTASSLQ RLGMGLGIAA LLGLVLGIAA GSIPLFGAPL SPLLTVLSMI
PPLAILPILF IVFGLGELSK VMLIAIGITP CIARDIEQRA REIPGELLIK AQTLGANTWT
LILRLVLPQL LPRLLISLRL MLGSAWLFLI AAEAIASTDG LGYRIFLVRR YMAMDVILPY
VVWITLLAWL MDLGLRQVLR LCFPWHEGGK A
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