| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1352 |
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| Symbol | |
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| ID | 5109405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1511975 |
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| End bp | 1513105 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502580 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001186849 |
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| Protein GI | 146306384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.308859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGT GGAATATCTG GCTTGACCGC GATCTCTGGC TCAACGTGGC AATCGTGGTG
GTGGCCACCG CGCTGATCTA CAGCGTGCTG CGCACCCTGG TCAGCACCCT GCACAAGCGG
TTGATGGCCT GGTCGAAGGA ACAGGACGGC AGTTGGCCGC ACTTCGTGGC GGTGGTGATC
GGCCGTACCA GCCGCCTGTT GCTGCTGGCC TTTTCCCTGT TGCTGGCGTT GCGTCTGCCG
GAGCTGCCCG GCAGTTGGCA GAGCGCGTTG AGCCATACCT GGTTCGTCGC CCTGGCCTTG
CAGGTGGCGC TGTGGGTGGA TACCGGCGTG CGCCTGTGGT CGCGCAGCTT GGTGATGAAG
AAAGGCGGCA CCTACAACCC GGTGATGACC ACCATCATCA GCATCATGAT CCTGATCGTG
GTGTGGTCGG TGATGCTGCT GTCGATCCTG GCCAACCTGG GGGTGGATAT CACCGCGCTG
GTGGCCAGCC TGGGTGTCGG CGGTATCGCC GTGGCGCTGG CGGTGCAGAC GGTGCTCAGC
GATGTGTTCG CCTCGCTGTC GATCGGCGTC GACAAGCCCT TCGAGATCGG CGACTTCGTG
GTGTTCGGCG AGGTGGCCGG GACCATCGAG CATATCGGCC TGAAGACCAC GCGCATCCGC
AGCCTCAGCG GTGAACAGGT GGTGTGCGCC AATGCCGACC TGCTGCGGCA GGTGGTGCGC
AACTACAAGC GCATGAATAC CCGGCGCATC GTCTTCAAGT TCGGCATCAA CTACGACACG
CCCAGCGACA AGGTGCGTCA GGTGGCCGAG AAGGTCGGCG ACATCATCCG CGCCACGCCC
AAGGCCAGGT TCGACCGCGC GCACTTTCTC GGTTTCGATG AAAGCCAGTT GACCTTCGAG
GTGGTCTATA TCGTGCTGAC CTCGGACTAC AACCAGTACA TGGACATCCA GCAGGAGATC
AACCTGCAGC TGCTCGATGC CCTGCGCGAA CTGGATGTGC GCTTCGCCCT GCCGCGTCGC
GACCTGCGCC TGGTGGGCGA GAAGATGCCG GTACTCAAGG TCGCCGGCCT GCCGCAGCAG
CTGGAAAACG AGGGCAGCGA CTCGGATCAG CGCCTGCCCC GGTTCAGCTA G
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| Protein sequence | MEQWNIWLDR DLWLNVAIVV VATALIYSVL RTLVSTLHKR LMAWSKEQDG SWPHFVAVVI
GRTSRLLLLA FSLLLALRLP ELPGSWQSAL SHTWFVALAL QVALWVDTGV RLWSRSLVMK
KGGTYNPVMT TIISIMILIV VWSVMLLSIL ANLGVDITAL VASLGVGGIA VALAVQTVLS
DVFASLSIGV DKPFEIGDFV VFGEVAGTIE HIGLKTTRIR SLSGEQVVCA NADLLRQVVR
NYKRMNTRRI VFKFGINYDT PSDKVRQVAE KVGDIIRATP KARFDRAHFL GFDESQLTFE
VVYIVLTSDY NQYMDIQQEI NLQLLDALRE LDVRFALPRR DLRLVGEKMP VLKVAGLPQQ
LENEGSDSDQ RLPRFS
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