Gene Pmen_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1346 
Symbol 
ID5109399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1506930 
End bp1507313 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content63% 
IMG OID640502574 
Productglycine cleavage system protein H 
Protein accessionYP_001186843 
Protein GI146306378 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT TGCGTTTCAC CGCCGATCAC GAATGGCTGC GTCTGGACAA CGATGGTCTG 
GTTACCGTCG GCATCACCCA TTACGCCCAG GACGCGCTCG GCGACGTGGT GTACGTACAG
CTGCCGGAAG TGAAGGCCTA CGCCCAGGGC GAAGAAGTGG CGGTGCTGGA GTCGGTGAAG
GCCGCCAGCA ACATCGTCAT GCCGCTGGAT GGCGAGATCG TCGAAATCAA CGCCGACCTG
GAAGGCAGCC CGGAGCTGGT CAACGAGTCG CCGCTGGACA AGGCCTGGTT CTTCCGCATG
CGCCTGGCCG ACAACGCCGT GCTCGCCGAC CTGCTGGACA AGGCCGGCTA TGATCGTCTG
TTGAACGCCA ACGCCGACGC CTGA
 
Protein sequence
MSELRFTADH EWLRLDNDGL VTVGITHYAQ DALGDVVYVQ LPEVKAYAQG EEVAVLESVK 
AASNIVMPLD GEIVEINADL EGSPELVNES PLDKAWFFRM RLADNAVLAD LLDKAGYDRL
LNANADA