Gene Pmen_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1342 
Symbol 
ID5109395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1500635 
End bp1501213 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID640502570 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001186839 
Protein GI146306374 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.288565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATC GCATTCGACT GGTATTGATA TACGGCAGCG TGCGTGAAGA GCGCTTCTGC 
GACCAGGTGG TGGCCTGGGC GCGCGAGCAG ATCGAACAGC GCAGCGAATT CGAGCTGAGC
CTGGTCGACC CGGCCGTGAT GTTCCGCCAG CCCGGCGAGC CGCAGGAGAT CGCGGAGCAG
CGCCATCAGT CGCTGCAGCA GCTGCTGCGC GCCGATGCCT TTCTGATCGT CACCCCGGAG
TACAACCACG GCTATCCGGC GGCGCTCAAG CAGTTCATCG ACGAGGTGCC GGCCTCCTGG
GAAGCGCGGC CGGTGGGGTT CGTCAGTTAT GGCGGGGTAT CCGGCGGGTT GCGTGCGGTG
GAACAGCTGC GCCAGGTGCT GGCGGAGCTG CATGCGATGA CGGTGCGTGG CTCGGTGAGC
TTCACCAATG CCTGGGAGCA GTTCGATGGG CAGGGCCGCC TGAGCGAGCC GCGGCGCGCC
AACTCGGCGC TGGCGCATAC GCTGGTGCAA CTGAACTGGT GGGCGCAGAC GCTGCGCGCC
GGGCGCGAGC GGGTGCCTTA CGAGCGGATC AGGGGTTAG
 
Protein sequence
MQDRIRLVLI YGSVREERFC DQVVAWAREQ IEQRSEFELS LVDPAVMFRQ PGEPQEIAEQ 
RHQSLQQLLR ADAFLIVTPE YNHGYPAALK QFIDEVPASW EARPVGFVSY GGVSGGLRAV
EQLRQVLAEL HAMTVRGSVS FTNAWEQFDG QGRLSEPRRA NSALAHTLVQ LNWWAQTLRA
GRERVPYERI RG