| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1329 |
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| Symbol | |
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| ID | 5109382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1489333 |
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| End bp | 1490127 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502557 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186826 |
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| Protein GI | 146306361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0610127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCG CTGAAAAACG CTCGCCGCTG TTCCACCAAC TGGTGGTCTA CCTGCTGTTT
CTGATCCTGC TGTTGCCGTT GCTCGGCACC CTGGTGTACT CGCTGTCCAC CAGTTGGTCG
GCGACCATCC TGCCCAGCGG CTTCACCTTC AAGTGGTACG TGGCGCTGTG GAGCGATGCG
CGCTTTCTCG CCGCCTTCGG TCGCTCACTG CTGGTGTGCT TCGGCGCCCT GGCGTTGTCG
CTGCTGCTGA TCCTGCCGCT GCTGTTCGTG GTCAACTACC ACTTCCCCAA GCTGGACGCG
CTGATGAACG TGCTGATCCT GCTGCCGTTC GCCATTCCGC CGGTGGTGTC CTCGGTGGGC
CTGATGCAGC TGTTCGCGTC CGGCCCGCTG CCGATCCTCG GTACGCCGTG GATCCTGATC
GGCTGCTACT TCACCATCGC CCTGCCCTTT ATGTACCGCG CCATCACCAA CAACCTGCAG
GCGATCAACC TGCGCGACCT GATGGACGCC GCCCACCTGC TCGGCGCCAG CACCTGGCGC
GCGGCCTTCC TGGTGGTGCT GCCGAATCTG CGCAAGGGTT TGATGGTTTC GGTGTTCCTG
TCCTTCAGCT TCCTGTTCGG CGAGTTCGTC TTCGCCAACC TGCTGGTGGG CAGCCGCTAC
GAAACGCTGC AGGTGTACCT GTACAACATG CGCAACGACA GCGGCCATTT CACCAGCGCC
CTGGTGATCT CCTATTTCAT GTTCGTGCTG CTGATGACCT GGGCGGCCAA CCGTCTGAAC
AAGGACAAAT CATGA
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| Protein sequence | MSPAEKRSPL FHQLVVYLLF LILLLPLLGT LVYSLSTSWS ATILPSGFTF KWYVALWSDA
RFLAAFGRSL LVCFGALALS LLLILPLLFV VNYHFPKLDA LMNVLILLPF AIPPVVSSVG
LMQLFASGPL PILGTPWILI GCYFTIALPF MYRAITNNLQ AINLRDLMDA AHLLGASTWR
AAFLVVLPNL RKGLMVSVFL SFSFLFGEFV FANLLVGSRY ETLQVYLYNM RNDSGHFTSA
LVISYFMFVL LMTWAANRLN KDKS
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