Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1319 |
Symbol | |
ID | 5109135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1477684 |
End bp | 1478169 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640502547 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001186816 |
Protein GI | 146306351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000280635 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGGC TGCTGTGGAA CCTGCGCGCG CGGCTTGGCT ACTGGCTTGC CCGGCGCCTG TTTCATTGGC CCGTGGCGCT GCGGCAGCCG CGCCTGTGGC AATGGATGCA GGGGCAGTAC GGGCGCATGG CCAACCTGGG CGACACCGCC GCACAAAGTT TCTACGGCCA TATCCTGCTG TTTCGCGGCC AGGGCCTCGG TGCACGCGAG GAGGGGCTGA GGCTGCTGCG CCTGGCCGCC AATGGCGGGG ATGGCAAGGC CGCCTATCAG CTGGGCGTGC AGGCGCTGCA GGGCGATACC CGGCAGCCGC CGGATGCCGC GCAAGCGCTG CGTTGGTGGG AGATGGCGCT GGCTGCCGGA CATCCCCTGG CGGCCAGCCG TCTGAGCCAG CTCTATCGCC AGGGCGGCCC TGGGGTGGAG GTCGATCTGC AAGCCGCCGA GCGCTACGCC GCCATGGCGG AAGGGGCGGG TCGCTCAGCC CGCTGA
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Protein sequence | MSRLLWNLRA RLGYWLARRL FHWPVALRQP RLWQWMQGQY GRMANLGDTA AQSFYGHILL FRGQGLGARE EGLRLLRLAA NGGDGKAAYQ LGVQALQGDT RQPPDAAQAL RWWEMALAAG HPLAASRLSQ LYRQGGPGVE VDLQAAERYA AMAEGAGRSA R
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