Gene Pmen_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1319 
Symbol 
ID5109135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1477684 
End bp1478169 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID640502547 
ProductSel1 domain-containing protein 
Protein accessionYP_001186816 
Protein GI146306351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000280635 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGGC TGCTGTGGAA CCTGCGCGCG CGGCTTGGCT ACTGGCTTGC CCGGCGCCTG 
TTTCATTGGC CCGTGGCGCT GCGGCAGCCG CGCCTGTGGC AATGGATGCA GGGGCAGTAC
GGGCGCATGG CCAACCTGGG CGACACCGCC GCACAAAGTT TCTACGGCCA TATCCTGCTG
TTTCGCGGCC AGGGCCTCGG TGCACGCGAG GAGGGGCTGA GGCTGCTGCG CCTGGCCGCC
AATGGCGGGG ATGGCAAGGC CGCCTATCAG CTGGGCGTGC AGGCGCTGCA GGGCGATACC
CGGCAGCCGC CGGATGCCGC GCAAGCGCTG CGTTGGTGGG AGATGGCGCT GGCTGCCGGA
CATCCCCTGG CGGCCAGCCG TCTGAGCCAG CTCTATCGCC AGGGCGGCCC TGGGGTGGAG
GTCGATCTGC AAGCCGCCGA GCGCTACGCC GCCATGGCGG AAGGGGCGGG TCGCTCAGCC
CGCTGA
 
Protein sequence
MSRLLWNLRA RLGYWLARRL FHWPVALRQP RLWQWMQGQY GRMANLGDTA AQSFYGHILL 
FRGQGLGARE EGLRLLRLAA NGGDGKAAYQ LGVQALQGDT RQPPDAAQAL RWWEMALAAG
HPLAASRLSQ LYRQGGPGVE VDLQAAERYA AMAEGAGRSA R