Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1259 |
Symbol | |
ID | 5109075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1421161 |
End bp | 1421574 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640502484 |
Product | thioesterase superfamily protein |
Protein accession | YP_001186756 |
Protein GI | 146306291 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000497987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGATTGA CCGCGTTGGA AGTGCAGACA CTGATTCGGG CCGGGTTGCC CATGGCCGAG GATATCGACC TGCGTATCGA CCGGCTGGAC GAGGAGGGCG TGCTGGCACG GGTGCCCTTT CATAGCAAGC TGGTGCGACC CGGTGGCACG CTGTCCGGCC CGACCATCAT GGCCCTCGGC GATGCCGCCA TGTATGCCGT GGTACTGGGG CGTCTCGGTC GGGTGGAGAT GGCGGTGACG TCCAATCTCA ATATCAACTT TCTGGTCAAG CCCCGGCCGG TGGACCTGCT GGCCGTGGCT CGAATACTGC GTTTGAGCAG GCGTCAGGCG GTATGTGAAG TTTCGTTGTA TTCGGCGGGC AATGAGAGTG AACTCGTCGC CCACGTAACG GGGACATATG CGTTGCCGAT TTGA
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Protein sequence | MGLTALEVQT LIRAGLPMAE DIDLRIDRLD EEGVLARVPF HSKLVRPGGT LSGPTIMALG DAAMYAVVLG RLGRVEMAVT SNLNINFLVK PRPVDLLAVA RILRLSRRQA VCEVSLYSAG NESELVAHVT GTYALPI
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