Gene Pmen_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1198 
Symbol 
ID5108699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1353604 
End bp1353915 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content69% 
IMG OID640502423 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001186695 
Protein GI146306230 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.114031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC GTGAGGCATT GCTGGGCCTG CAGCATGAAT ATCGTGTCCG CGCCGAGGCC 
ATCCGGCGCG ACCTGGGGCG TAGCCATTCG CCGGACTTCG CCGAGCAGGC GCAGCAGCGG
CAGAACGACG AAGTCCTGGA AGCCCTGCTG GCCGAGGCCG AGCTGGGCCT GGCCCTGGTC
AATCAGGCCT TGGCGCGCGT CGCCGATGGC AGCTACGGGC TGTGCCTGAA ATGCGGCGAG
CCGATCAGCG AGGCGCGCCT GAACGCCATC CCGGCTGCGG AGTACTGCCT GGGCTGCGCC
TCGGTCAGGT AA
 
Protein sequence
MNRREALLGL QHEYRVRAEA IRRDLGRSHS PDFAEQAQQR QNDEVLEALL AEAELGLALV 
NQALARVADG SYGLCLKCGE PISEARLNAI PAAEYCLGCA SVR