| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1145 |
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| Symbol | |
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| ID | 5108118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1288602 |
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| End bp | 1289516 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502369 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186644 |
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| Protein GI | 146306179 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.610214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.415034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG CCAAGAAGGA CCTGAATCTG CTGCTGGTCT TCCATGTGCT CTATCAGGAG
CGCAACGCCT CGCTGGCGGC CGAACGCATG GCGCTGAGTC AGCCCGCCCT GAGCCACAAG
CTGAACAAGC TGCGGCATCA GTTCGGTGAC CCGCTGTTCG TTCGCGCGCC GCGAGGGTTG
ACACCGACGC CGCGGGCCCA TGAGCTGGCG CCGCAGGTTC AGCGCCTGGT GGGGGAACTG
GAGGGGTTCT ACGAGCGCTG CGATGGGCAG GACTTTCTCG GGCGTGTCGA GCGCTTGCAT
CTGTACAGCA CCGATTACAT CGAGCAGACC CTGCTGCCCA GGCTGCTGCC GATTCTGCGC
CAGCAGGCAC CGAACCTGGT GCTGGTCACC CACAACACCC GTGGCCAGCT ACCGCGTGAC
GAGCTGGAGA AGGGCACCTG CGACCTGGCC ATCGCCGGCT TCTACAAGGA CCTGCCGGGC
ACTTTCCATC AGCAGCGTCT GCTCAGCGAG GACTTCGTCG TGCTCGCCGC GCATGACAAC
CCACGCCTCG CGCGCGGCCT GGATCTGCAG AGTTTCGTCG CCTGCGAGCA TCTGATCACC
ACGCTGACGG GGGATCTCGA GGGACTGGTG GACAGGGCGT TGCAGCAACG GGGGCTGCAG
CGGCGGATCG CTGCCGGGCT GTCCAGCTTC GTTGCCCCGC CGCGCCTGCT GCGCGGCAGC
GACCTGTTGC TCACCTGCCT GCGCTCGCTG GCGCAGGAGG CGGTCGCCCG GGACCCCGAG
CTGCGCATGC ATCCGCTACC GCTGGAGTTG CCGCGTGTCG AGGTGATGCA GATCTGGCAC
GAGCGCACCC ACGCCGACCC GTTGCGCAGC TGGTTCCGCC GCCAGGTGCA GGCAGTCGCG
CAGGCGGCGG ACTAG
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| Protein sequence | MNIAKKDLNL LLVFHVLYQE RNASLAAERM ALSQPALSHK LNKLRHQFGD PLFVRAPRGL
TPTPRAHELA PQVQRLVGEL EGFYERCDGQ DFLGRVERLH LYSTDYIEQT LLPRLLPILR
QQAPNLVLVT HNTRGQLPRD ELEKGTCDLA IAGFYKDLPG TFHQQRLLSE DFVVLAAHDN
PRLARGLDLQ SFVACEHLIT TLTGDLEGLV DRALQQRGLQ RRIAAGLSSF VAPPRLLRGS
DLLLTCLRSL AQEAVARDPE LRMHPLPLEL PRVEVMQIWH ERTHADPLRS WFRRQVQAVA
QAAD
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