| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1133 |
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| Symbol | |
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| ID | 5108106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1271975 |
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| End bp | 1274719 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640502357 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_001186632 |
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| Protein GI | 146306167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCTA TCTATGTCGA TGGGCAGGAC AAGACTAAAC AAATCAGCGA TTGGCGCATC
TGGTGGGATG AAAAAGCCGA AGTCTTGAAG CTGACGTGCC ATTACCCGTC CACGAAGAAA
TACACTCGTC CTCTAAGTGT TTGTCGCGTC GAACCCACGC GCGAGTTACG CAATGTGCTG
CTGGAGAAAC AGGACAGTAT CGTCAGTACC ACTGTCGAAC GGGTCGAGAT CTACGGTGAG
CGCTATGCCG TGGTCTATTA CTCCAAGGAT GCCCGACGAC CGTACGTCCG TAACCTGGAC
GGCATCAGGT TCGTTTCACC TACCGGCATA AAGGACGAAC CCGTTTTCGG TTATTTCCAG
GCAGTCGCCA ATGCCTGGGT CGACACCGCG AAAACTGCGG ACGATAAGCA GATTGCCGCC
AACGTTGTGA AGCAATTGAA GGAACTGCCT GTTCTTTCGT CGAGTGCCTT GCAGGCATAT
TGCTCGGGCA GCAATGAGGC TCGGTTACCT GGCGAGGGTT TGATCTATCC CTTCGGTATC
AACGAAAGCC AGCTCATGGC GGTCGAGCAG GCCTTCAGCG CGCAGATCAG TCTGATCGAG
GGGCCGCCGG GGACGGGCAA GACCCAGACC ATTCTCAATA TCCTCGCCAA TATCCTTCTG
CGCGGTCAGA CGGTCGCCGT ACTATCCAAC AACAATGCCG CCGTGGAAAA CGTCTACGAG
AAGCTGGGCA AGTCTGGCCT GGACTATCTA GTGGCCAAGC TGGGCAACCG GGACAACCGC
GAAGACTTCT TCGCCCAGGT GCAGCCCGTG CCATCTGGCG AGCCCGAGCC AGCTCCGCCG
ATGGAGGAAA TCCAGGCTGT ACTGGAGCGG CTGAAGCGTC TCCTGCACGA GCATAATCTG
GCGGCCCAGC TCAAGGCGGA AATCGATGAG TTGAACATTG AGCGGCGTTA TCTGGAGCAA
TGGCAGAAGG ACAACGGCGC TCAGCCAACC GCCTCCTTGG CCAGGTATCG TCTATCCCCG
CGCGAGACCA CGGACCTGAT GGCCTATCTC GCCCATCTAA CGGGGCAGCG GTTGCGGCTC
AAGGATCGGT TCGAGCTGCT CTTCAAGTTC AGGATTTTCC GCGCCAAACC GCTCGCCGAC
GAGGAAGCGC GTTTGTCCTT CTTCGATGCC TTACAGTCGC ACTTCTACGA CGAGCTGCTG
CGCAAGAAGG AAGACGACCT GCGCACGTGT AACGAGGCAT TGGCGCGTGG TGACTTCAGT
GCGCTGCTGG AGGAGCTGAT GCTGGGGTCG ATGCGTATGC TCAAGCATCG CTTGCATGAG
CAGATTCGCG ATTCCCACAG CTTCGATGCG AAGACCTATC GCAAGCACTT CGATGCATTT
GTGAAGCGCT TTCCCATACT TGGTAGCAGC ACCCATTCGA TCGTCAACTC GATCGCGCCT
GGAGCTGTGC TTGACTACGT CATCATCGAC GAGGCCTCAC AGCAGGACAT CGTGCCGGGC
ATTCTGGCGT TGGGCTGCGC GAAGAACCTG ATCGTGGTCG GCGACAACAA GCAGTTGGCG
CATATTCCTG CAGCGACTGG CCTGGCGGCT CCGCTGGAAC CTTACGATTG CGAGCGCTAC
AGCCTGCTCG ACTCCTGCAT GCAAGTGTTC GGGGACGCGA TGCCCAAGAC CTTGCTCAAG
GAGCACTACC GCTGCCATCC CAGGATCATC CAGTTCTGCA ACCAGCAGTT CTATGCCGAT
GCCCTGGTGC CCATGACAGA GGATAACGGC GAAGCGCCCT TGCGCTTAGT GGTGACTGCC
AAGGGCAATC ATGCCCGCAA GAACATCAAC CTCAGAGAGG TGGAGTCCTT GCTCAAGGTG
CTTGAGGGCG ATGGTGAGGG CGCGTGGGTA GACGGCGACG GGCGCGGTTT GATCGCGCCG
TTCAGGGCGC AGGCTACGCT CTCCAAGGCG CACCTGCCCG ATGACTTCGT GACCGATACC
GTGCACAAGT TTCAGGGGCG CGAATGCGAT GAAATCGTTT TCTCTACGGT GCTGGACAAG
AAGCAATACA ACCAGAGCCA AGGCCGCCTG AGCTTCGTCG ATGATCCGCG CATGGTCAAC
GTGGCCGTTT CGCGGGCCAA GCACCGTTTC ACCTTGGTAA CGGGGGACGA GGTTTTCGCC
AGGAATAATG GCCCTGTCGC AGCCTTGATC CGTTACATCG AATACTACGC CGAGGATAAA
GAGATTCAGC GGGCACCGGT GGTTTCGGCG TTCGACCTGC TCTACAAGGA ATACGATAAA
TCCCTAGAGC GCCTGCGCAA CCGTTTGAGG AAGGAGGACT CACGCTTTGT CTCCGAGCAG
ATCATGGCGC AGATACTGCG TGAAGCATTT GCAGACGACG CGTTGCAGGC GCTGAAGTGG
CACAAAGAGG TGGCGTTGAA CAAGATCGCT GTCGCGGAAA ATCCTCAATT GACTGATCAC
GAGCGCCAGT TCATGCGCCG TTCCAGTTGC GATTTCGTGA TCTATTTCAG GGTCGGTAAG
CGGCCGGTAG GGGTGATTGA GGTTGACGGC GGCTCGCATG ACAAACCTGA TCAGATCGTG
CGGGATAACC TCAAGAACAG CATTCTGAAG AAAAGTGGCA TTGACGTTCT GCGTGTACGC
ACCGTCGATA GCGGCATCGA AGAAACGGTG CGCGATTTTC TCGCCCAGTG GGCGAGCCCG
GAGTCAGGCC CGCTCGTTAC TCTGAGCGGA CCTGAAAGCA CTTAG
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| Protein sequence | MVAIYVDGQD KTKQISDWRI WWDEKAEVLK LTCHYPSTKK YTRPLSVCRV EPTRELRNVL
LEKQDSIVST TVERVEIYGE RYAVVYYSKD ARRPYVRNLD GIRFVSPTGI KDEPVFGYFQ
AVANAWVDTA KTADDKQIAA NVVKQLKELP VLSSSALQAY CSGSNEARLP GEGLIYPFGI
NESQLMAVEQ AFSAQISLIE GPPGTGKTQT ILNILANILL RGQTVAVLSN NNAAVENVYE
KLGKSGLDYL VAKLGNRDNR EDFFAQVQPV PSGEPEPAPP MEEIQAVLER LKRLLHEHNL
AAQLKAEIDE LNIERRYLEQ WQKDNGAQPT ASLARYRLSP RETTDLMAYL AHLTGQRLRL
KDRFELLFKF RIFRAKPLAD EEARLSFFDA LQSHFYDELL RKKEDDLRTC NEALARGDFS
ALLEELMLGS MRMLKHRLHE QIRDSHSFDA KTYRKHFDAF VKRFPILGSS THSIVNSIAP
GAVLDYVIID EASQQDIVPG ILALGCAKNL IVVGDNKQLA HIPAATGLAA PLEPYDCERY
SLLDSCMQVF GDAMPKTLLK EHYRCHPRII QFCNQQFYAD ALVPMTEDNG EAPLRLVVTA
KGNHARKNIN LREVESLLKV LEGDGEGAWV DGDGRGLIAP FRAQATLSKA HLPDDFVTDT
VHKFQGRECD EIVFSTVLDK KQYNQSQGRL SFVDDPRMVN VAVSRAKHRF TLVTGDEVFA
RNNGPVAALI RYIEYYAEDK EIQRAPVVSA FDLLYKEYDK SLERLRNRLR KEDSRFVSEQ
IMAQILREAF ADDALQALKW HKEVALNKIA VAENPQLTDH ERQFMRRSSC DFVIYFRVGK
RPVGVIEVDG GSHDKPDQIV RDNLKNSILK KSGIDVLRVR TVDSGIEETV RDFLAQWASP
ESGPLVTLSG PEST
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