Gene Pmen_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1128 
Symbol 
ID5108101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1267529 
End bp1268314 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID640502352 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001186627 
Protein GI146306162 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG AGCCCATCGT GCTGTTCGAT AACGGCAGCC ACCAATGCCT GATGTTCGAT 
GACCTGGTCA GCGGCGAGGG CGTGCAATCC AACCAGTTCC TGATCACCGA CCACGAACAG
TACCTGCTGC TCGATCCGGG AGGCGACCTG ACCTATACGC CGCTGTCGCT GGAGCTGTCC
AAGCACATCC CGGTGCAGGA CCTGACCTAC ATCTTCGCCT CGCACCAGGA CCCGGACATC
ATCGCCTCGC TGGACAAGTG GCTGCTGCAC ACCCGCGCGC GGGTGATCTG CTCCAAGTTG
TGGGCGCGCT TTCTGCCGCA TCTGACGGCC AACTACCTGG CGCTGAGCCG CGGCATCAAC
ACCTACGACC GCATCATCGC GCTGCCCGAC CGCGGCCAGA GCATTCCGCT GGGCAAGTGC
TCGCTCAAGG CGGTGCCGGC GCACTTCCTG CACTCGGTGG GCAACTTCCA GGTCTACGAC
CCGGTGAGCA AGATCCTCTT CTCCGGCGAC ATGGGCGCCT CGATGGTCGA CGACGCTTCG
CCGGTGCGCG ACTTCGTCAA CCACGTGCCG AACATGGAGG GCTTCCACCG CCGCTACATG
GCCGGCAACA AGGCCTGTCG CCTGTGGGCG GCGATGGTGC GCGAAATGGA CGTGGCGATG
ATCGTGCCGC AGCACGGCCG CCCCTTCGTT GGCGCCGAGA TGATCAGCGC CTTCCTCTAC
TGGATCGAGA ACCTGGAGTG CGGTCTCGAC CTGATGGGCC CCGACGATTA CCGCCTGCCG
AACTAG
 
Protein sequence
MRREPIVLFD NGSHQCLMFD DLVSGEGVQS NQFLITDHEQ YLLLDPGGDL TYTPLSLELS 
KHIPVQDLTY IFASHQDPDI IASLDKWLLH TRARVICSKL WARFLPHLTA NYLALSRGIN
TYDRIIALPD RGQSIPLGKC SLKAVPAHFL HSVGNFQVYD PVSKILFSGD MGASMVDDAS
PVRDFVNHVP NMEGFHRRYM AGNKACRLWA AMVREMDVAM IVPQHGRPFV GAEMISAFLY
WIENLECGLD LMGPDDYRLP N