Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1124 |
Symbol | |
ID | 5108097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1263920 |
End bp | 1264768 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502348 |
Product | UspA domain-containing protein |
Protein accession | YP_001186623 |
Protein GI | 146306158 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA TTCTGGTAGC CACCGATCTG TCCGAGCGCT CGGCTCACGC CGTGCAGCGT GCCGTGCAAC TGATCCGCCG CCAGGGTGGC GGCGAGTGGT GTCTGCTGCA CGTGATCGAC GACGATGCGC CGGCCGAGCA CGTCGCCAGC CAGGTGCAGC AGGCCGAGAC GCTGCTGCAT GCGCAGGCCG AGCGCCTGGC CGAGCAGGCC GGCAGCCGTC CGCACGTGGT GGTGGGCAGT GGCGAGCCTG CGGCGATCAT CGTCGAGAGC GCCCAGGGCA TGGGCGCCGA CCTGCTGGTG GTGGGCGCGC ATCGCAAATC GGCGCTGCGC GACTTCTTCG TCGGCACCAC CCTGGAGCGC GTGGTGCGCA GCAGCCATCT GCCGGTGCTG CGGGTCAACG GCCCGGTCAC CCGCGAGTAC CGTCATGCCC TGCTGGCGAT GGACCTGTCG CGCACCTCGC AGCAGGCCTT GCGCCAGGCT CGCCAACTGG GCCTGCTGGC CGCCGATGAC TTCCATGTGG TCGGTGCAGT GGAGCCGGTG GCGCCGGGCG CGATGATGGA GGCTGGTCTG AGCGTCGAGG TGCTGCAGAA TCAGCGCGAG CTGCTGCGTC AGCAACTGGT CGAGCGCCTG AGCGAGGACG GGGTGAGCCT GGCGAACGAG CGTCTGCAAG TGCATGTGGG CTCGCCCGAG GGCGTGATCG GCGAGGCGCT GCGCCAATCC GGTGCCGACC TGCTGGTGCT CGGCACCCAT GCCCGCGAAG GGTTGTCGCG CTTCTTTCTG GGCAGTGTGG CCAGTCGTCT GCTGGCCACG GTCGACAGCG ATGCGCTGGT AGTGCCGCCG GCCGCGTGA
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Protein sequence | MIKILVATDL SERSAHAVQR AVQLIRRQGG GEWCLLHVID DDAPAEHVAS QVQQAETLLH AQAERLAEQA GSRPHVVVGS GEPAAIIVES AQGMGADLLV VGAHRKSALR DFFVGTTLER VVRSSHLPVL RVNGPVTREY RHALLAMDLS RTSQQALRQA RQLGLLAADD FHVVGAVEPV APGAMMEAGL SVEVLQNQRE LLRQQLVERL SEDGVSLANE RLQVHVGSPE GVIGEALRQS GADLLVLGTH AREGLSRFFL GSVASRLLAT VDSDALVVPP AA
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