| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1113 |
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| Symbol | |
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| ID | 5108086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1252885 |
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| End bp | 1253841 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502337 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186612 |
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| Protein GI | 146306147 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.293194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCC TGCATGGCAT GCGCGTGTTC GTTCAGGTGG TCGAGCGCGG CAGCTTCACC
GCCGCAGCCC AGGCGCTGGA TCTGTCTACC GCGCAGGTGT CACGGCTGAT TGCCGATCTG
GAGCAACATC TCGAGGCACG CCTGCTGCAG CGCACCACGC GGCGCCTGGC CCTGACCGAA
ACCGGCGAGC GCTATCTGGA GCGCTGCCGG CAGATTCTCG GCCAGATCGA GGAAGCCGAT
GCCGAGGCGC GCGGCGCTCA TCGCACGCCC AGTGGACGCC TGCGCGTGCA CACCATGACC
GGCCTCGGCC TGCAGCACAT CACCCCGCTG ATCGCCCGCT ACGCCGAGCG TTATCCACAG
GTGGTGGTGG AACTCACTCT GGCGCAGCGC ACGCCGGATC TGCTCGAAGA TGGTCATGAC
GTGACCATCG CCTTCGCCCG CGACCTGCCG GATTCGCAAC TGGTCGCACA GCGTCTCGGC
CCGGTGTACA GCGTGCTCTG CGCCGCCCCC AGCTATCTGG CCGGACATGG CGTTCCGCAA
CGGCCCAGCG ACCTGCAGCA GCATCGCTAC CTGCGCCTGA CCGACCCGCT GTACCGCGGT
CAGTGGGATT TCGGTGACGA GCAGCTCGAC GCCCTGCCGG CCGAGTGCTT TCAGGTCAAT
GTCGCCGAAG CACTGGTCAA GGCGGCGCAG GCAGGCATGG GCTTCTGCCT GCTGCCCTCG
TTCGTTGCCA GCCAGCCGCT GCGTGAAGGA CGCCTGCTGC GCATCCTGCC GCAGCACCGC
CTGCGCGCGC TGAACATCTA TGCGATGTAT CCGTCGCGGC GCCTTCTCGA TGCCAAGACC
CGCACCTGGG TGGAGTTTCT CAAGGCCGAA CTGCCGCCAC TGTTACGGGG GGACGAAGCG
GTGCTGGACG ATGAGCGATA TTGGGCGACG CCCGACAGAT TGTTGCGCGA AAGGTAA
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| Protein sequence | MDTLHGMRVF VQVVERGSFT AAAQALDLST AQVSRLIADL EQHLEARLLQ RTTRRLALTE
TGERYLERCR QILGQIEEAD AEARGAHRTP SGRLRVHTMT GLGLQHITPL IARYAERYPQ
VVVELTLAQR TPDLLEDGHD VTIAFARDLP DSQLVAQRLG PVYSVLCAAP SYLAGHGVPQ
RPSDLQQHRY LRLTDPLYRG QWDFGDEQLD ALPAECFQVN VAEALVKAAQ AGMGFCLLPS
FVASQPLREG RLLRILPQHR LRALNIYAMY PSRRLLDAKT RTWVEFLKAE LPPLLRGDEA
VLDDERYWAT PDRLLRER
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