| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1089 |
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| Symbol | |
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| ID | 5108062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1225021 |
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| End bp | 1225950 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502313 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001186588 |
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| Protein GI | 146306123 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.937606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.197064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA GCTCGTCGTC TTCCGCCACC GTTTACAGCG CCCCCATCCT GCGCAAGCTG
GCCGAGGTCG CGCCACAGCT GCAGCCCTCG CTGCGCAAGG TGGCCGACTT CATCCTGCGC
CATCCGCTGA AGGCCGCAAC CCTGACCATC GAAGAGCTGG CGCAGGCCAC GCACACCTCG
CCGGCGGCGG TCAATCGCCT GGCCAAGGCC ATGGAGCTGC GCGGCTACAT CAGCCTGAAG
GCCGAGCTGG TCGCCACCCT GCAGGACATG GTGTCGCCGG TGGACAAGCT GCGCGACGAG
CTGGCGCAGC GCCCGGACGG GGCCTTCGGC CTGCACGAAC AACTGCAGAT CGCCAGCAGC
AATCTCGGTG CGGCGGCCAG CAACAATGAC GCCGCCGTGT TCGAGGCGGT GATCGGACGC
CTGCTCGGGG CGCGCCGCAT CTACATTCTC GGCTTCGGCA ACAGCGCCTA CATGGCCGGC
TTGGCTGCAG CCAACCTGGT GCCCTTCTGC GATGACGCCA CCGCCATCAG CATGGAAGGC
GGCAACGAAA ACGCTGCCTA CCGCCTGGCC GCCATCACCG AACGCGACGT GCTGCTGACC
ATCTCCCTGC CGCGCTATTC GCTGGACACC CTGCAGCTGG CGCGTTTTGC CCGCGAACGC
GGCGCCTGCG TGCTGGCCAT CACCGACTCG CCCGCCTCGC CGCTGGTGGA GATCGCCGAG
TACAGCCTGT TCGCCCCCGC CGAACACCCG GTGCTGATCA GCTCCAATGC CGCCGTGCTG
GCCCTGATCG AAGCCCTGGT GGCAGGTGTC ATGGCGCGCA ACAAGGAGGC GGTGAGCCTG
GCTCAGGAGC TGACCGAGAG CGTCATGGCC TACCTGCACG TCCCGGGCAC CGAGCGCGCG
CCGCGTCGCC CACGCAAACG CCGCCCCTGA
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| Protein sequence | MPSSSSSSAT VYSAPILRKL AEVAPQLQPS LRKVADFILR HPLKAATLTI EELAQATHTS
PAAVNRLAKA MELRGYISLK AELVATLQDM VSPVDKLRDE LAQRPDGAFG LHEQLQIASS
NLGAAASNND AAVFEAVIGR LLGARRIYIL GFGNSAYMAG LAAANLVPFC DDATAISMEG
GNENAAYRLA AITERDVLLT ISLPRYSLDT LQLARFARER GACVLAITDS PASPLVEIAE
YSLFAPAEHP VLISSNAAVL ALIEALVAGV MARNKEAVSL AQELTESVMA YLHVPGTERA
PRRPRKRRP
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