| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1076 |
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| Symbol | |
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| ID | 5107735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1212941 |
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| End bp | 1213864 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502300 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001186575 |
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| Protein GI | 146306110 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
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| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.610214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.634966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCATGCG AGGACGATGC CATGCATATC CTACTGACCG GCGGTACCGG CCTGATTGGG
CGTGCGCTTT GCGCGCACTG GGTCGAGCAC GGCCATCGCC TGACGGTCTG GAGCCGTGAG
CCGGGCAAGG TGGCCGGCCT GTGCGGGCCA ACGGTGCGGG GGATCGGGCG GCTCGAGGAG
CTGGCCGAGG AGCCGCTCGA TGCGGTGGTC AACCTGGCCG GTGCGCCCAT CGCCGACCGC
CCCTGGAGCA GCAAGCGCAA GGCGCTGCTG TGGGCCAGCC GCATCGGCCT GACCGAGCAG
CTGCTGAACT GGCTCAAGAG CCGCGAGCAG CGTCCGGCGC TGTTGCTGTC GGGCTCGGCG
GTGGGCTGGT ACGGCGACGG CGGCGAGCGT GAGCTGCACG AGGACACGCC GCAGGTCACC
GACGATTTCG CCGCGCAGCT GTGCGGCGCC TGGGAAGAAA CTGCACAACG CGCCGAGGAG
CTGGGTATGC GCGTGGTGCT GGTGCGTACC GGTCTGGTGC TGAGCGCGGA CGGCGGCATG
CTCAAGCGTC TGCTGCTGCC GTTCCGGCTC GGGCTGGGCG GGCGTCTCGG CGACGGCCGG
CAGTGGATGC CGTGGATCCA TATCGCCGAC CAAATCGGCC TGATGGATTT TCTCTTGCAG
CAGGAGGCCG CCCAGGGTCC CTATAATGCG TGCGCGCCGC TGCCGGTGCG CAACGCCGAG
TTCACCAAGG CGCTGGGCCA GGCGTTGAGC CGGCCGGCCA TTCTGCCGGT GCCGGCGTTC
GCCCTGCGTG CCGGTCTTGG CGAGTTGTCC GAGCTGCTGC TTGGCGGCCA GCGCGCCGTG
CCGAAGCGTC TGCTCGAGGC CGGTTTCAGT TTCCGCTTCA CCCATCTGGA TGTGGCCCTG
GCCGATCTGC TGGGCCACCC CTGA
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| Protein sequence | MPCEDDAMHI LLTGGTGLIG RALCAHWVEH GHRLTVWSRE PGKVAGLCGP TVRGIGRLEE
LAEEPLDAVV NLAGAPIADR PWSSKRKALL WASRIGLTEQ LLNWLKSREQ RPALLLSGSA
VGWYGDGGER ELHEDTPQVT DDFAAQLCGA WEETAQRAEE LGMRVVLVRT GLVLSADGGM
LKRLLLPFRL GLGGRLGDGR QWMPWIHIAD QIGLMDFLLQ QEAAQGPYNA CAPLPVRNAE
FTKALGQALS RPAILPVPAF ALRAGLGELS ELLLGGQRAV PKRLLEAGFS FRFTHLDVAL
ADLLGHP
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