| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1028 |
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| Symbol | |
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| ID | 5108650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1164690 |
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| End bp | 1166066 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502250 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001186528 |
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| Protein GI | 146306063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTGC CCCTACTTCG CCCCGCCCTG CTCGGCCTCG CCGTCAGCGC CACGCTGGCT
GGCTGCGCCG GGCTGCCGGA CCAGCGCCTG GCCCGCGAAG CGCTGCAGCG CGGCGATCAG
CAGACCGCCG AATGGCATTT CCGTGAGCTC GCCGAGATGG GCTACGGCGA CGCGCAGATC
GGCCTGGCGG ACATCTACGC CGCCAAGGGC CAGAGCCAGG ATCTGGATGA GGCCGAGCGC
ATCTACCGCC AGGCCATGGA CGGTTCGCCG CGCGCCCAGG CGCGCCTGGG CAAGCTGCTG
GCGCGCAAGC CCGGCAGCAC CCTGGCCGAG CGCCGCGAGG CCGCCGAGCT GCTGGAAAGC
GCGGCCAAGG CTCGCGAGCC CAGCGCGCTG CTGCCGCTGA CCGAACTCTA CCTGTTCTAC
CCACAGGACT TTCCCGCCAT GAACCTCGCG CAACGTATCC AAGACTGGCG CCAGCAGGGT
CTGCCGCAGG CAGAACTGGC GCAGATTCTC CTGTATCGCT CCGATGGCAC CTACGACCAG
CACCTGGGCG AGATCGAGCG CATCTGCCAG GCTCGCCTGG CCAGCAACGA TGCCTGCTAC
GCCGAGCTGG CCACGGTGTA CCAGAAGCAG AACCGCGAGG ACGACCGTCA GGCCCTGCTC
GACCGTCTTC TCGCCGGCTA CCGCGCCGGC AGCGTCTCGC CCAACCAGGT CGAGTCCGTG
GCCCAGGTGC TCAGCGACCC CGAGCTGGGC CAGCCGCAAC CGCAGCTCGC CCAGGACCTG
CTGGAAACCA TCGCCCCGGA CTACCCAGCC GCCTGGGTCA GCCTGGCGCG CCTGCTCTAC
GACTACCCGG CCCAGGGCGA CACCGAAACC CTGCTCGGCT ACCTGGAGAA AGGCCGCGAG
GCCGCTCTGC CGCGCGCCGA ACTGCTGCTC GGACGCCTGT ACTACGAAGG CAAGCTGCTG
CCGCAAGAAC CGCGCAAGGC CGAAGAGCAC CTGCGCAAGG CCGCGCCCAG CGAACCGAGC
GCCAATTACT ACCTGGGGCA GATCTACCTG CGCGGCTACC TCGGCGAGGT CTATGCCCAG
CAGGCGCTGG ATCACCTGCT CAGCGCCGCC CGCGCCGGCC AGCTCAGCGC CGACTTCGTT
CTCGCGCAGA TGTTCAGCCA GGGCCGCGGG GTCAAACCCA ACCCGGTCAA CGCCTATGTC
TTCAGCCAAC TGGCCCTGCC GCGCAACACG CCGCCGACCT TCGAGCTGGC GCACGAGGTG
GCCGAGAGCC TGACCCCGGC ACAACTGGCC GAGGGCCAGC GCCTGCTGCG CGAAGAGCGC
GAGGCCCGCG GCATCGTCCT GCAGCAGCAG GCCGCCCTGC AGGTCAGCCA GCCATGA
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| Protein sequence | MTLPLLRPAL LGLAVSATLA GCAGLPDQRL AREALQRGDQ QTAEWHFREL AEMGYGDAQI
GLADIYAAKG QSQDLDEAER IYRQAMDGSP RAQARLGKLL ARKPGSTLAE RREAAELLES
AAKAREPSAL LPLTELYLFY PQDFPAMNLA QRIQDWRQQG LPQAELAQIL LYRSDGTYDQ
HLGEIERICQ ARLASNDACY AELATVYQKQ NREDDRQALL DRLLAGYRAG SVSPNQVESV
AQVLSDPELG QPQPQLAQDL LETIAPDYPA AWVSLARLLY DYPAQGDTET LLGYLEKGRE
AALPRAELLL GRLYYEGKLL PQEPRKAEEH LRKAAPSEPS ANYYLGQIYL RGYLGEVYAQ
QALDHLLSAA RAGQLSADFV LAQMFSQGRG VKPNPVNAYV FSQLALPRNT PPTFELAHEV
AESLTPAQLA EGQRLLREER EARGIVLQQQ AALQVSQP
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