| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1008 |
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| Symbol | |
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| ID | 5108630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1136745 |
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| End bp | 1137626 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502225 |
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| Product | DNA-binding transcriptional regulator IlvY |
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| Protein accession | YP_001186508 |
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| Protein GI | 146306043 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0484713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000276968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGCC ATTCCCTCCG ACTTTTTCTC TCTCTCGCAG ACAATCTGCA CTTCGGCCGT
ACCAGCCGCG AGCAGCATGT CAGCCCTTCG GCGCTCAGCC GCAGCATCAA GCAGCTGGAG
GATGAACTGG GGGCCGCGCT GTTCGTGCGC GACAACCGTT CGGTGCGCCT GACCCGCGAG
GGTCAGCAGT TTCGCGAGTA CGCGAGCGAG GTCATGAACG GCTGGCAGGC AATCCGCCAG
ACCTTCATGC AGGACCAGTT GAACCTGCAT GGCGAGCTGT CGCTATATTG CTCGGTCACC
GCGAGCTACA GCTTTCTCTA CGACATCCTC AGCAGCTTCC GCCAGGATTA CCCACGCATC
GAGATGAAGC TGCACACCGG TGATCCGGCG AAAGCCGTCG AACGTGTGCA GCAGGGACTG
GAGGATCTGG CCATCGGCGC CCTCCCCGAC AGCCTGCCGG CCGGGGTGGA ATTTCAGTCG
ATAACACGCT CGGAGCTCCG CTTTATCGGT CCGCTAGCGC CGCAACTGCT GAACGAGGAA
CAGCTTAAGC ATCCGACAGC CGAGAGCTGG AAGGACGTGC CGATGATTCT CTCGGAAGAA
GGCCTGGCTC GAACGCGCAC CGATCGCTGG CTGAAAAGTC ACAACATCAA GCCGCGCATC
TATGCCCAGG TCAGCGGCAA CGAGGCCATC GTCAGCATGG TGAGCCTGGG CTTCGGTATT
GGCGTGGTGC CGCAGATCGT GCTGGACAAC AGCCCGCTGA CCGCACGCAT TCGCCTCTAC
GACATCCAGC CACCGCTCAC CGCGTACGAC ATCGGTCTGT TCGCCCTGGA AAAACGCCTC
AAGGACCCTC TGATCGCTGC GTTCTGGAAT CGCCAGAGCT GA
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| Protein sequence | MDSHSLRLFL SLADNLHFGR TSREQHVSPS ALSRSIKQLE DELGAALFVR DNRSVRLTRE
GQQFREYASE VMNGWQAIRQ TFMQDQLNLH GELSLYCSVT ASYSFLYDIL SSFRQDYPRI
EMKLHTGDPA KAVERVQQGL EDLAIGALPD SLPAGVEFQS ITRSELRFIG PLAPQLLNEE
QLKHPTAESW KDVPMILSEE GLARTRTDRW LKSHNIKPRI YAQVSGNEAI VSMVSLGFGI
GVVPQIVLDN SPLTARIRLY DIQPPLTAYD IGLFALEKRL KDPLIAAFWN RQS
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