Gene Pmen_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1005 
Symbol 
ID5108627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1133638 
End bp1134072 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID640502222 
Producthypothetical protein 
Protein accessionYP_001186505 
Protein GI146306040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.368062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000106362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCACA TGATTCTAAC TGGCAGCTTG ATGCTCGCTC TGAGCGCAAC CGCCATGGCC 
AGCCAGGTCT ACAAGTGGGT GGATGAAAAC GGCGTGACTC ATTTCGGCGC GCAGCCACCG
CAAGGCCAGC AGGCCACCAC GATCAACACC GCTGCGCCAC CTCCCCGCCC GACCCCGAGC
GAGCCGGCTC CGAGCGTCGA AGAGCTGCTC GACCCGGAGC AGGCGGCCAT CGACAAGAAG
GTCAAGCAGG ACGTGGCGAA GCAGGAGGCC GAGCGTAAGA AGTATTGCGA GACGGCCCGC
ACCAATCTGG CTCAGCTGGA AAACAATCCG CGCGTCCGTA TCGAAGCCGA GGGCGAACTG
CGCCGCATTG GCGAAGATGA GCGCCAAGAG CGTATCGCCG AACTGAAAAA ATCTATCGCA
GATACCTGCC AGTGA
 
Protein sequence
MRHMILTGSL MLALSATAMA SQVYKWVDEN GVTHFGAQPP QGQQATTINT AAPPPRPTPS 
EPAPSVEELL DPEQAAIDKK VKQDVAKQEA ERKKYCETAR TNLAQLENNP RVRIEAEGEL
RRIGEDERQE RIAELKKSIA DTCQ