Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1005 |
Symbol | |
ID | 5108627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1133638 |
End bp | 1134072 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640502222 |
Product | hypothetical protein |
Protein accession | YP_001186505 |
Protein GI | 146306040 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.368062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000000000106362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCCACA TGATTCTAAC TGGCAGCTTG ATGCTCGCTC TGAGCGCAAC CGCCATGGCC AGCCAGGTCT ACAAGTGGGT GGATGAAAAC GGCGTGACTC ATTTCGGCGC GCAGCCACCG CAAGGCCAGC AGGCCACCAC GATCAACACC GCTGCGCCAC CTCCCCGCCC GACCCCGAGC GAGCCGGCTC CGAGCGTCGA AGAGCTGCTC GACCCGGAGC AGGCGGCCAT CGACAAGAAG GTCAAGCAGG ACGTGGCGAA GCAGGAGGCC GAGCGTAAGA AGTATTGCGA GACGGCCCGC ACCAATCTGG CTCAGCTGGA AAACAATCCG CGCGTCCGTA TCGAAGCCGA GGGCGAACTG CGCCGCATTG GCGAAGATGA GCGCCAAGAG CGTATCGCCG AACTGAAAAA ATCTATCGCA GATACCTGCC AGTGA
|
Protein sequence | MRHMILTGSL MLALSATAMA SQVYKWVDEN GVTHFGAQPP QGQQATTINT AAPPPRPTPS EPAPSVEELL DPEQAAIDKK VKQDVAKQEA ERKKYCETAR TNLAQLENNP RVRIEAEGEL RRIGEDERQE RIAELKKSIA DTCQ
|
| |