Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0971 |
Symbol | |
ID | 5108593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1096193 |
End bp | 1096795 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502188 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001186471 |
Protein GI | 146306006 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.325702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCG CCATGAACAG CATTCGACTC GACAAGCGTG ACCTGATCCT GAGCAAGGGC TCGGCGGTGA TGACCCGGCG CGGCTATCAC GGCACCGGCG TGCTGGAAAT CGTCCAGGCT GCCGGCATTC CCAAGGGCAG CTTCTATCAC TACTTCGCGA GCAAGGAAGA CTTCGCCCTG CAGGCGCTGG CCTTCATCTA TCGCCCGCGT CTGGAGCGTT ACGCCCAGGC GTTGAGCAAT GGCGCGCTGA GCCCGCGGGC GCGCATCCTG GCCTACTACC GCGACCTGCT GGCGCACTTC GCCCGCCAGG ACACGCCGCA ATATCACTGC TTCATCGGCA GCCTGAGTTT CGAGATGAGC GAGATGCTGC CGGCCATCGG CGCCGAGGTG GAGGCGATCC AGCAGGCCTC GGTGGACATC CTGCGCGACT GCCTGGAGCA GGCGCAGGCC GCCGGTGAAC TGCCGGCCAC CGAGGACTGC GGCAATCTCG CCACTTTCAT CAGCGATGCC TGGCAGGGCG TGCTCGCCCG CCTCAAGGTG GGTCGCAACC TGCAGCCGCT GGAAGCCTTC ATTAACCGCC TGGAGCGTTT GCTGCAGGCC TGA
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Protein sequence | MLGAMNSIRL DKRDLILSKG SAVMTRRGYH GTGVLEIVQA AGIPKGSFYH YFASKEDFAL QALAFIYRPR LERYAQALSN GALSPRARIL AYYRDLLAHF ARQDTPQYHC FIGSLSFEMS EMLPAIGAEV EAIQQASVDI LRDCLEQAQA AGELPATEDC GNLATFISDA WQGVLARLKV GRNLQPLEAF INRLERLLQA
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