| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0964 |
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| Symbol | |
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| ID | 5108586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1088508 |
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| End bp | 1089593 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502181 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001186464 |
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| Protein GI | 146305999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0437682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGTGG TGGGAGGCGG TGCCATTGGT CTATTGACCA GCCTGCTATT GGCACGCGCA
GGTGTCTCGA TCATGCTGAT CGAATCGTCC CGTGTCGGCA GCGAATCCTC CTGGGCCGGC
GGTGGCATCG TTTCGCCGCT CTATCCGTGG CGCTACGGCG CGGCGGTGAC GGCGTTGGCG
CATTGGTCGC AGGATTTCTA TCCGGGGTTT GCGCGGCAGT TGTGGGAAGA CACTGGCGTC
GATCCCGAGG TGCACGTCAC CGGGTTGTAT TGGCTGGATC TCGATGACGA GGCCGAGGCG
CTGGCTTGGG CTGCGCGTGA GGGGCGGGTG TTGCGTGGCA TCGACATGGC CAGCGTGCAT
GAGCAGGTGC CGGTGCTGGG CGAAGGTTTT ACCCGCGCCA TTCATATGCC GGGTGTGGCC
AACGTGCGCA ACCCGCGGCT GGTCAAGGCG CTGAGGGCGG CGTTGGCTGC CATGCCCAAC
GTGGAGCTGC GTGAGCATTG TCCGGTCACC GGGTTCATTC AGGAGGATGG GCAGATTCGC
GGTGTAATCA CCAGCGATGG CGAGGTGCGT GCCGAGCGCG TGGTGCTGGC AGCCGGTGCC
TGGAGTGGCG AGATGCTCAG GACGCTTGGC CTGGAGTTGC CGGTCGAGCC GGTGAAGGGG
CAGATGATCC TCTACAAGTG CGCCGAGAAT TTTCTGCCGA GCATGGTGCT GGCCAGGGGG
CGTTATGCGA TTCCACGGCG AGATGGGCAT ATCCTGATCG GCAGTACGCT GGAGTACGCC
GGCTTCGACA AGACGCCGAC CAATGGCGCG CTGGAGAGCC TAAAGGCTTC CGCCGAAGAG
CTGCTGCCGG CGCTGAAGGA TGCCGAGGTG GTGGGGCACT GGGCGGGATT GCGGCCGGGC
TCACCGCAGG GCATTCCCTT TATCGGGGAG GTGCCTTCGC ATCCGGGCTT GTGGCTCAAC
TGCGGGCACT TTCGCAACGG CCTGGTGCTT GCACCTGCGT CCTGCCGGTT GCTGACCGAC
CTGCTGCTGG GGCGCGAGCC CATCATCGAT CCGGCGCCCT ATGCACCAGC GCGGCGGTTG
GGCTGA
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| Protein sequence | MVVVGGGAIG LLTSLLLARA GVSIMLIESS RVGSESSWAG GGIVSPLYPW RYGAAVTALA
HWSQDFYPGF ARQLWEDTGV DPEVHVTGLY WLDLDDEAEA LAWAAREGRV LRGIDMASVH
EQVPVLGEGF TRAIHMPGVA NVRNPRLVKA LRAALAAMPN VELREHCPVT GFIQEDGQIR
GVITSDGEVR AERVVLAAGA WSGEMLRTLG LELPVEPVKG QMILYKCAEN FLPSMVLARG
RYAIPRRDGH ILIGSTLEYA GFDKTPTNGA LESLKASAEE LLPALKDAEV VGHWAGLRPG
SPQGIPFIGE VPSHPGLWLN CGHFRNGLVL APASCRLLTD LLLGREPIID PAPYAPARRL
G
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