| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0961 |
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| Symbol | |
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| ID | 5108819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1086702 |
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| End bp | 1087262 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640502178 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001186461 |
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| Protein GI | 146305996 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.747798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.89267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG CAAAAGGCTT CAGCCTGATC GAAGTGCTTA TGGCTCTTCT GCTTACGACC
GTGGGCGTGC TTGGCATGGT CGCACTGCAA GGCCGCAGCA TTCAGTACAC CCAGGACGCG
GTGCAGCGCA ACACTGCCGT GGAACTGGCC AATGACCTGA TTGAGATCGT CCGCGCCAAC
CCTCAGCAGA TGTTCAACAA CGTGCCCCCG ACGTTTCCCA TGAACAGCGG CATGCGCAAC
TCCTCAGCCT TCTACAAGGC GAAGAACGAG GATTTCAGCA ACCGCGAAGA TTGTGTCGTC
AGCGCCAGTG AACTGGCGAA GACAGCCCAG GAACAACGCG ACTGTTGGGC AGAACGAGTA
GAAAACCTAC TGCCGGGCGG TAGCGAATTG TTCACCAGCG ATATGTACAT CTGCCGCAGC
GCCACACCTG GAGAATGCAC AGCCAACCAG GGCTCGATGC TTGAGATTCG ACTGGCCTGG
CAGGTACGTG CTGGCGCCTG CCTTGATGCC AGCGATCCCC AGGCCACCGT TTGTACCTAC
ACTGTGCGGG TTCAGCCATG A
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| Protein sequence | MTTAKGFSLI EVLMALLLTT VGVLGMVALQ GRSIQYTQDA VQRNTAVELA NDLIEIVRAN
PQQMFNNVPP TFPMNSGMRN SSAFYKAKNE DFSNREDCVV SASELAKTAQ EQRDCWAERV
ENLLPGGSEL FTSDMYICRS ATPGECTANQ GSMLEIRLAW QVRAGACLDA SDPQATVCTY
TVRVQP
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