| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0880 |
|---|
| Symbol | |
|---|
| ID | 5108974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 999018 |
|---|
| End bp | 999323 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640502096 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001186380 |
|---|
| Protein GI | 146305915 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.156501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCAGG CGAGCATCAG CGAAAGCGCG CCGGGGCAGC TGCAGCTTTC CGGCGTGCTC
GACTACAGCA CCGGCCCGCT GCTGCGCGAG CAGGGCGCGC GCCGGATCGC CGCCAGCAGC
GCGGCGCGTC TGTCGCTCGA CTGCGGCGCG GTGGAGAAGT CCAGCAGCGT CGGTCTGGCC
CTGCTGCTGG CATTCGTCCG CGATGCGCGC AAGGCCGGGC GCGAGCTGGT GATCACCGGC
CTGCCCGAGG ACATGCGGCA GATCGCCCAG GTCAGCGGGC TGCTGGAGTT GCTGCCGCTG
GAATAA
|
|---|
| Protein sequence | MSQASISESA PGQLQLSGVL DYSTGPLLRE QGARRIAASS AARLSLDCGA VEKSSSVGLA
LLLAFVRDAR KAGRELVITG LPEDMRQIAQ VSGLLELLPL E
|
|---|
| |