Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0842 |
Symbol | |
ID | 5108936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 960993 |
End bp | 961559 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502058 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001186342 |
Protein GI | 146305877 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG ATCGCATTGG CGAACGTTTG CGCCGCTACC GGCGGGCCGC CGGCAAGACT CTCAATCAGG TGGCGGCCGA GGCCGGCCTG ACCGCCAGCT TTCTGTCCCA GGCAGAGCGC AACCTGACCG GCGTCTCGCT ATCCTCGCTG GCCAGCATCG CCAAGGCGCT CGACGTGCCG CTCAACGTGT TGTTCGACCA GCCCGCCCAA CCGCAGCCGG ATTCGCACGT GAACGAGCGG GTGCGCTACA CCGTCGGCGG CCAGCTGCTG GCCTACGAAC GCCTGTCCAG CTCGTTTCCC GGTAACTCGA TCAATGCGGT GAAGATGAAC ATTCCGGTGG GCTATCAGTC GGAGCTGATT GCCCATGAAG GCGTGGAGTT TTCCTACGTG CTCAGCGGGC GGATCGTCTA CACCATCGAA GGTCGCGACT ACCCGCTCGG CCCCGGAGAC TCGGTGCATT TCGATGCCGG CAAGCTGCAT CGCCTGGCCA ACAGCGCCGA CACCCCGGCC GAAGTGCTGA CCATGACCAC CATGGCGCTT TTCGACGATC ACCCCGTCAA CGAGTGA
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Protein sequence | MTADRIGERL RRYRRAAGKT LNQVAAEAGL TASFLSQAER NLTGVSLSSL ASIAKALDVP LNVLFDQPAQ PQPDSHVNER VRYTVGGQLL AYERLSSSFP GNSINAVKMN IPVGYQSELI AHEGVEFSYV LSGRIVYTIE GRDYPLGPGD SVHFDAGKLH RLANSADTPA EVLTMTTMAL FDDHPVNE
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