Gene Pmen_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0822 
Symbol 
ID5108916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp936580 
End bp936969 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID640502038 
Producthypothetical protein 
Protein accessionYP_001186322 
Protein GI146305857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG TTCTGTTGCT CGCCGCCCTG CTGAGCCCGA CGCTCGCCGC CCAACCCCTG 
GCCCCGCTGC CTACCACGAC CCAAGGCGAA GGCTATGCGG TGCTGATCGT CTCGCGCGAG
CGTCTCGAGG TGGCCTCCAC CTGCGAGGTG GCGCTGTATC TGTATGACCA GATGGCCGCA
CGTCTGCACC AGGGCCAGTC GGTGGCGTTC AACCTGCCAC CGGGCAAGGT CTCGTTGCGC
CTCGGCCTGA CCGGCAGCGG CTCCTGCGAG GGCGGGATCG CCCAGCTCAA TGGCGAGGCG
CTGGACCTGT ACGCAGGCGA GGTCCGGCGT TATCGCATCG CCATGGACAG CAGCGGCCTG
CGACTGCATG CCGCGCCGCC CTCGCACTGA
 
Protein sequence
MRPVLLLAAL LSPTLAAQPL APLPTTTQGE GYAVLIVSRE RLEVASTCEV ALYLYDQMAA 
RLHQGQSVAF NLPPGKVSLR LGLTGSGSCE GGIAQLNGEA LDLYAGEVRR YRIAMDSSGL
RLHAAPPSH