| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0781 |
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| Symbol | |
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| ID | 5108875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 879289 |
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| End bp | 880122 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501997 |
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| Product | signaling modulator of AmpD, AmpE |
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| Protein accession | YP_001186281 |
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| Protein GI | 146305816 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC TGGTGATTTT GCTGGTGCTG TGGGTCGAGA AATTTTCCGC CTGGCGCCTG
CGCATCCAGC AGGATGGTCC CTGGCTCGCG CAGTTGCAGC GGCTGCAGCA GGGCAGCCTG
CAACAGGCGC CCTGGTTGTG TCTGGCGGTG CTGGTGCTGT TGCCCGTGCT GGCTTTGGGG
CTGGTGCTGC TGATTCTCGA GCCGCTGGCA TATGGCTGGC TGGCCTTGCC GGTGCATCTG
CTGGTGCTGA TCTACAGCCT GGGCCGCGGC GACCTGCTGG CTGCACTGGG GCCGTTTCGC
GATGCCTGGC GGCGTGGCGA CGGGCAGGCC GCCTATCATG TGGCTGAGCG CGACCTCGCC
CTGCAACCCG AGGACGGCAC GCTGCTGCTG CAGCAGGTTC AGGGGCATCT GCTGTGGCAG
GCCTATCAGA GTTTCTTCGC GGTGATCTTC TGGTATCTGC TGCTGGGGCC GATGGCGGCC
TTGGCCTACC GTCTGCTGGC CATGAGCGCC GAGCATGCCG AGCAGCCGGC GCTACGCGAG
CGTGCCGTGC AGCTGCGCCA TGCCTTCGAC TGGCTGCCGG CGCGGGTACT GGCCGCCAGC
TTTGCCCTGG TCGGCAACTT CGTGGCGGTC AGCCGCGCCT TGCTGCATGA ACTGCTGAGC
TGGGACATCT CGGCCGCGCA GGTGGTGATC AGGGCAGGGC GCGCCGCCGG GGAGATGCCC
GAGCCGGTGA TGGGCGAGGC GGGCGTCGAT ACCCTGGATC AGTTGTGGCA GCTGCTGATT
CGCGCGGCGG TGGTCTGGTA CGCCGGCTAC GCGCTGTGGG TGCTGCTGGT CTAA
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| Protein sequence | MSFLVILLVL WVEKFSAWRL RIQQDGPWLA QLQRLQQGSL QQAPWLCLAV LVLLPVLALG
LVLLILEPLA YGWLALPVHL LVLIYSLGRG DLLAALGPFR DAWRRGDGQA AYHVAERDLA
LQPEDGTLLL QQVQGHLLWQ AYQSFFAVIF WYLLLGPMAA LAYRLLAMSA EHAEQPALRE
RAVQLRHAFD WLPARVLAAS FALVGNFVAV SRALLHELLS WDISAAQVVI RAGRAAGEMP
EPVMGEAGVD TLDQLWQLLI RAAVVWYAGY ALWVLLV
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