| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0750 |
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| Symbol | |
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| ID | 5108844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 844835 |
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| End bp | 846154 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501963 |
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| Product | Zn-dependent protease-like protein |
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| Protein accession | YP_001186250 |
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| Protein GI | 146305785 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC GTCAGCATTT CTGCGAGTTG CTGGCTCATC TGCAGGCGCA GGTCGCCGGC
GAGGAGGGCT TCACCCTGGC CTACAGCGCC GAGCAGTCCG GCTTCGTCCG CTTCAACCAC
GGGCGGGTGC GCCAGGCCGG GCAGGTGCAG CAGTCGTACG TGACCCTGGC GCTGTACCAG
GGCCAGCGCC ACGCCGAGAG CCGGCTGGCG CTCGGCGGCA CGCTCGAGGA AGACCTGCCG
CGCCTGCAGC AGGCCCTGCA ACAGCTGCGC GCCGTACTGC CGACGTTGAG CGACGACCCC
TATCTGCGCC TGAACCGCGA AGCCTGGCGC AGCGAGCTGG CGGTCGAGGC CACGCTGCCC
GACAGCGCGG CCATGGCGCA GCAGATCGTC AGCGCCGCCA GCGGTCTGGA TCTGGTCGGC
TTTCTTGCCG TCGGGCCGCA GTACCAGGGC TTCGCCAGTT CCTGGGGTGC GTTCGGCTGG
TATGCCGCCA GCAGTTTCAA CCTCGAATTC AGCCTGTTCC ATGACAACGG CCAGGCGGTG
AAAAGCGCCT ATGCCGGCGA GCAGTGGGAC GTCCAGGCGT TCGCCCGCAA GCTCGAGGAC
GCGCGGCAGC AGCTGGCCTA TCTCGGCCGC CCGGCCAAGG CCTTGCAGCC CGGGGCTTAT
CGGGCCTACC TGGCGCCGGC TGCGCTGGAG GAGCTGATCA GCCTGTGCTG CTGGGGTTTC
GGCGCGCAGG CGCTGGCCTC GGGTGGCAGC CCCCTGCAGC GTCTGTTCAG CGGCAAGGCC
GAGCTCAGCT CACAGGTGGT CATTGAAGAG CGTATCGAAG GCGGCCTGGC GCCGGTCTTC
ACTGCCGAGG GGCCGCGCCA GGCGCTGCGT CTGGTCAGCC AGGGCCGGCC CGGCGAGCGC
CTGGTCAGTT CGCGCAGCGC CGCCGAATAC GGCCTGATCG CCAATGGCGC CTGCAGCGGC
GAGTATCCGC TGTCCCTGCG CATGCACGGT GGCGAGCTGG ACGAGCAGGA CGTTCTGCAG
CGGCTGGGCA GTGGTCTGTA TATCGGCAAC CTGTGGTACG GCAACTTCTC CGACCTGCCG
GCCGCCCGCC TGACCGGCAT GACCCGCTTC GCCACCTTCT GGGTCGAGGA TGGGCAGATC
CAGGCGCCGG TCAACACCAT GCGCTTCGAC GACTCGCTGT TCGATGTGCT CGGCGCGCAG
CTCGAAGCCC TGACCCGCGA GCCCGAACTG CTGCTGCCCG GCGGCACCTA CGGCGCCCGG
CAGACCGGCT CGATGGCGCT GCCGGGGGCA TTGCTGTCGC GCTTTACCCT GACCTTGTAG
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| Protein sequence | MDARQHFCEL LAHLQAQVAG EEGFTLAYSA EQSGFVRFNH GRVRQAGQVQ QSYVTLALYQ
GQRHAESRLA LGGTLEEDLP RLQQALQQLR AVLPTLSDDP YLRLNREAWR SELAVEATLP
DSAAMAQQIV SAASGLDLVG FLAVGPQYQG FASSWGAFGW YAASSFNLEF SLFHDNGQAV
KSAYAGEQWD VQAFARKLED ARQQLAYLGR PAKALQPGAY RAYLAPAALE ELISLCCWGF
GAQALASGGS PLQRLFSGKA ELSSQVVIEE RIEGGLAPVF TAEGPRQALR LVSQGRPGER
LVSSRSAAEY GLIANGACSG EYPLSLRMHG GELDEQDVLQ RLGSGLYIGN LWYGNFSDLP
AARLTGMTRF ATFWVEDGQI QAPVNTMRFD DSLFDVLGAQ LEALTREPEL LLPGGTYGAR
QTGSMALPGA LLSRFTLTL
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