| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0733 |
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| Symbol | |
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| ID | 5108827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 827538 |
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| End bp | 828305 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501946 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001186233 |
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| Protein GI | 146305768 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.263143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGGT TGTTGCGCCT GCTGCTGTTG TCGCTGCTTT GTGCCGAACT CTCGGCGACG
GAGCTGGTGC TCTATACGGA AGAGAATCCG CCCATCAACT TCAGCCAGGC CGGCGAGCCT
GACGGCATGG CCGTCGAGGT GGTCCGGGAA CTGCTGCAGC GCACCGACAG CCGCGCGCAG
ATCCTCAGCG TGCCCTGGGC GCGCGGCTAC CGGATGGCGA CCACCCAGCC CGACGTCGGC
CTGTTCGTGA CGGTGCGCAC TCCCGAGCGC GAGACGCTGT TCCGCTGGGT CGGGCCGATC
ATCAGTACCC GCACCAGTCT GTACGCCCGC AGTGGCGAGG CGCTGCCGGT CACCAGCCTG
GAAGAGGCCC GGCAACTGGG GCGCATCGCC GTGCCGCGTG ACTGGTATTC GCATCAGGTG
CTGGTGCGGC TGGGGTTCAG CAACCTGGAG CTGGTGCCGA AACCCCACGA AATGGTGCGC
ATGACCCTGC TGGGGCGGGT GCCTCTGATG GTCTACGAGG ACCAGTTGCT GCCGGGCCTG
CTGCAGGAGG TGGGCGCGGC GCCGGATGCC CTGCAACATG TGCATACCTT CATGCGCACC
AGCAGCTATA TCGCCTTCTC CCTCGGCACC GACCCGGTGC TGGTGCAGCG CTGGCAGGCG
GAACTCGACG CGATGAAGCA CGACGGCAGC TTCGCGCGCA TCCATCTGCG CTGGTTTCCC
GATGAGCCAC CCGCGGGATT GCTGGCCGAT CAGGACCTGC TGCCGTGA
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| Protein sequence | MTGLLRLLLL SLLCAELSAT ELVLYTEENP PINFSQAGEP DGMAVEVVRE LLQRTDSRAQ
ILSVPWARGY RMATTQPDVG LFVTVRTPER ETLFRWVGPI ISTRTSLYAR SGEALPVTSL
EEARQLGRIA VPRDWYSHQV LVRLGFSNLE LVPKPHEMVR MTLLGRVPLM VYEDQLLPGL
LQEVGAAPDA LQHVHTFMRT SSYIAFSLGT DPVLVQRWQA ELDAMKHDGS FARIHLRWFP
DEPPAGLLAD QDLLP
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