| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0697 |
|---|
| Symbol | |
|---|
| ID | 5109027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 768984 |
|---|
| End bp | 769682 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640501910 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001186197 |
|---|
| Protein GI | 146305732 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAG TCCAACAACT CCACCAGTAT TACGGCGGCA GCCACATCCT CCGTGGCCTG
TCGTTCGACG TGAAGGTCGG CGAGGTCACC TGCCTGCTCG GCCGCAACGG CGTGGGCAAG
ACTACCCTGC TCAAATGCCT GATGGGCCTG ATCCCGGCCA AGGACGGCCA TGTGCAATGG
GAAGGCAAGG CCATCACCGC CTACAAGCCG CACCAACGCG TACACGCCGG CATCGCTTAC
GTGCCCCAGG GCCGCGAGAT CTTCGGTCGC CTGACGGTAG AGGAAAACCT GCTGATGGGC
CTGTCACGCT TTCCCGGCAG CCAGGCCAAG GAAGTGCCGG CGTTCATCTA CGAACTCTTC
CCGGTGCTGC GCGAGATGAA GCATCGCCGC GGCGGCGATC TCTCCGGTGG CCAGCAGCAA
CAACTGGCCA TCGGCCGCGC CCTGGCCAGC CAGCCGCGCC TGTTGATCCT CGACGAACCC
ACCGAAGGCA TCCAGCCCTC GGTGATCAAG GAGATCGGCG CGGTGATCAA GAAGCTCGCC
GCCCGTGGCG ACATGGCCAT CCTGCTGGTG GAGCAGTTCT ACGACTTCGC CGCCGAACTG
GCCGACCAGT ACCTGGTGAT GAGCCGCGGC GAAATCGTCC AGCAGGGCCG TGGTGAGAAC
ATGGAAGCCG AAGGCGTACG CGGACTGGTG GCCATCTAG
|
|---|
| Protein sequence | MLQVQQLHQY YGGSHILRGL SFDVKVGEVT CLLGRNGVGK TTLLKCLMGL IPAKDGHVQW
EGKAITAYKP HQRVHAGIAY VPQGREIFGR LTVEENLLMG LSRFPGSQAK EVPAFIYELF
PVLREMKHRR GGDLSGGQQQ QLAIGRALAS QPRLLILDEP TEGIQPSVIK EIGAVIKKLA
ARGDMAILLV EQFYDFAAEL ADQYLVMSRG EIVQQGRGEN MEAEGVRGLV AI
|
|---|
| |